Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
RAPGEF3O95398 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC32.12■■■□□ 2.73
RAPGEF3O95398 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
RAPGEF3O95398 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC32.11■■■□□ 2.73
RAPGEF3O95398 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
RAPGEF3O95398 TK2-213ENST00000563369 882 ntTSL 5 BASIC32.11■■■□□ 2.73
RAPGEF3O95398 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC32.11■■■□□ 2.73
RAPGEF3O95398 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC32.11■■■□□ 2.73
RAPGEF3O95398 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC32.11■■■□□ 2.73
RAPGEF3O95398 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC32.11■■■□□ 2.73
RAPGEF3O95398 ABCB10P4-201ENST00000566803 2184 ntBASIC32.11■■■□□ 2.73
RAPGEF3O95398 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
RAPGEF3O95398 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
RAPGEF3O95398 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC32.1■■■□□ 2.73
RAPGEF3O95398 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC32.1■■■□□ 2.73
RAPGEF3O95398 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
RAPGEF3O95398 AC233702.5-201ENST00000584107 538 ntBASIC32.1■■■□□ 2.73
RAPGEF3O95398 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
RAPGEF3O95398 AC133561.5-201ENST00000635547 218 ntBASIC32.1■■■□□ 2.73
RAPGEF3O95398 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
RAPGEF3O95398 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
RAPGEF3O95398 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RAPGEF3O95398 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
RAPGEF3O95398 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
RAPGEF3O95398 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
RAPGEF3O95398 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RAPGEF3O95398 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
RAPGEF3O95398 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
RAPGEF3O95398 SLC29A4P2-201ENST00000504749 1089 ntBASIC32.09■■■□□ 2.73
RAPGEF3O95398 CD44-222ENST00000526025 1052 ntTSL 2 BASIC32.09■■■□□ 2.73
RAPGEF3O95398 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RAPGEF3O95398 AL445228.2-201ENST00000605589 952 ntBASIC32.09■■■□□ 2.73
RAPGEF3O95398 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC32.09■■■□□ 2.73
RAPGEF3O95398 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RAPGEF3O95398 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC32.09■■■□□ 2.73
RAPGEF3O95398 AC092368.3-202ENST00000574180 1591 ntBASIC32.08■■■□□ 2.73
RAPGEF3O95398 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC32.08■■■□□ 2.73
RAPGEF3O95398 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC32.08■■■□□ 2.73
RAPGEF3O95398 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
RAPGEF3O95398 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
RAPGEF3O95398 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
RAPGEF3O95398 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
RAPGEF3O95398 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC32.08■■■□□ 2.73
RAPGEF3O95398 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.73
RAPGEF3O95398 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
RAPGEF3O95398 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
RAPGEF3O95398 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
RAPGEF3O95398 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC32.07■■■□□ 2.72
RAPGEF3O95398 AC012618.2-201ENST00000428058 849 ntBASIC32.07■■■□□ 2.72
RAPGEF3O95398 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC32.07■■■□□ 2.72
RAPGEF3O95398 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC32.07■■■□□ 2.72
RAPGEF3O95398 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC32.07■■■□□ 2.72
RAPGEF3O95398 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
RAPGEF3O95398 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC32.06■■■□□ 2.72
RAPGEF3O95398 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
RAPGEF3O95398 AC087499.1-201ENST00000418141 1075 ntBASIC32.06■■■□□ 2.72
RAPGEF3O95398 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
RAPGEF3O95398 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
RAPGEF3O95398 AC061975.6-201ENST00000579045 1553 ntBASIC32.06■■■□□ 2.72
RAPGEF3O95398 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC32.05■■■□□ 2.72
RAPGEF3O95398 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC32.05■■■□□ 2.72
RAPGEF3O95398 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RAPGEF3O95398 RPS2P55-201ENST00000397318 883 ntBASIC32.05■■■□□ 2.72
RAPGEF3O95398 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC32.05■■■□□ 2.72
RAPGEF3O95398 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC32.05■■■□□ 2.72
RAPGEF3O95398 AC107956.1-201ENST00000494359 873 ntBASIC32.05■■■□□ 2.72
RAPGEF3O95398 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RAPGEF3O95398 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RAPGEF3O95398 SOX15-203ENST00000570788 1093 ntBASIC32.05■■■□□ 2.72
RAPGEF3O95398 AC012306.2-201ENST00000609350 630 ntBASIC32.05■■■□□ 2.72
RAPGEF3O95398 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC32.05■■■□□ 2.72
RAPGEF3O95398 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC32.05■■■□□ 2.72
RAPGEF3O95398 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC32.05■■■□□ 2.72
RAPGEF3O95398 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC32.05■■■□□ 2.72
RAPGEF3O95398 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
RAPGEF3O95398 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC32.04■■■□□ 2.72
RAPGEF3O95398 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
RAPGEF3O95398 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
RAPGEF3O95398 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC32.04■■■□□ 2.72
RAPGEF3O95398 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
RAPGEF3O95398 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
RAPGEF3O95398 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC32.03■■■□□ 2.72
RAPGEF3O95398 LINC01124-201ENST00000409786 2117 ntBASIC32.03■■■□□ 2.72
RAPGEF3O95398 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
RAPGEF3O95398 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC32.03■■■□□ 2.72
RAPGEF3O95398 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RAPGEF3O95398 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC32.03■■■□□ 2.72
RAPGEF3O95398 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC32.03■■■□□ 2.72
RAPGEF3O95398 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RAPGEF3O95398 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC32.03■■■□□ 2.72
RAPGEF3O95398 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC32.02■■■□□ 2.72
RAPGEF3O95398 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
RAPGEF3O95398 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
RAPGEF3O95398 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC32.02■■■□□ 2.72
RAPGEF3O95398 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC32.02■■■□□ 2.72
RAPGEF3O95398 AC097493.4-201ENST00000641197 219 ntBASIC32.02■■■□□ 2.72
RAPGEF3O95398 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
RAPGEF3O95398 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
RAPGEF3O95398 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.72
RAPGEF3O95398 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms