Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN3O60637 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN3O60637 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.76■■□□□ 1.07
TSPAN3O60637 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.76■■□□□ 1.07
TSPAN3O60637 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.76■■□□□ 1.07
TSPAN3O60637 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.76■■□□□ 1.07
TSPAN3O60637 AC061975.6-201ENST00000579045 1553 ntBASIC21.76■■□□□ 1.07
TSPAN3O60637 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
TSPAN3O60637 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN3O60637 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.76■■□□□ 1.07
TSPAN3O60637 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.76■■□□□ 1.07
TSPAN3O60637 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN3O60637 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN3O60637 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN3O60637 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
TSPAN3O60637 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.75■■□□□ 1.07
TSPAN3O60637 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN3O60637 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN3O60637 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN3O60637 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.75■■□□□ 1.07
TSPAN3O60637 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.75■■□□□ 1.07
TSPAN3O60637 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
TSPAN3O60637 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.75■■□□□ 1.07
TSPAN3O60637 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.75■■□□□ 1.07
TSPAN3O60637 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN3O60637 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN3O60637 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN3O60637 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN3O60637 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN3O60637 ECEL1P1-201ENST00000373592 1742 ntBASIC21.75■■□□□ 1.07
TSPAN3O60637 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.74■■□□□ 1.07
TSPAN3O60637 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN3O60637 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TSPAN3O60637 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN3O60637 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN3O60637 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TSPAN3O60637 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.74■■□□□ 1.07
TSPAN3O60637 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN3O60637 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TSPAN3O60637 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN3O60637 AC006970.2-201ENST00000450065 779 ntBASIC21.74■■□□□ 1.07
TSPAN3O60637 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.74■■□□□ 1.07
TSPAN3O60637 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.74■■□□□ 1.07
TSPAN3O60637 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.74■■□□□ 1.07
TSPAN3O60637 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.74■■□□□ 1.07
TSPAN3O60637 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.74■■□□□ 1.07
TSPAN3O60637 AC010536.3-201ENST00000620306 533 ntBASIC21.74■■□□□ 1.07
TSPAN3O60637 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN3O60637 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN3O60637 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN3O60637 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN3O60637 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.74■■□□□ 1.07
TSPAN3O60637 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN3O60637 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN3O60637 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN3O60637 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN3O60637 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.73■■□□□ 1.07
TSPAN3O60637 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.73■■□□□ 1.07
TSPAN3O60637 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.73■■□□□ 1.07
TSPAN3O60637 MIR663A-201ENST00000385250 93 ntBASIC21.73■■□□□ 1.07
TSPAN3O60637 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.73■■□□□ 1.07
TSPAN3O60637 AC007322.1-201ENST00000426983 750 ntBASIC21.73■■□□□ 1.07
TSPAN3O60637 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TSPAN3O60637 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.73■■□□□ 1.07
TSPAN3O60637 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
TSPAN3O60637 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN3O60637 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN3O60637 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.73■■□□□ 1.07
TSPAN3O60637 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN3O60637 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN3O60637 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TSPAN3O60637 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN3O60637 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN3O60637 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN3O60637 HLA-L-209ENST00000420110 1011 ntBASIC21.72■■□□□ 1.07
TSPAN3O60637 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.72■■□□□ 1.07
TSPAN3O60637 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.72■■□□□ 1.07
TSPAN3O60637 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.72■■□□□ 1.07
TSPAN3O60637 AC120498.10-201ENST00000621827 505 ntBASIC21.72■■□□□ 1.07
TSPAN3O60637 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TSPAN3O60637 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.72■■□□□ 1.07
TSPAN3O60637 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN3O60637 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.72■■□□□ 1.07
TSPAN3O60637 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.72■■□□□ 1.07
TSPAN3O60637 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.72■■□□□ 1.07
TSPAN3O60637 AC012676.1-201ENST00000574705 1949 ntBASIC21.71■■□□□ 1.07
TSPAN3O60637 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN3O60637 POU5F1P4-201ENST00000413175 1085 ntBASIC21.71■■□□□ 1.07
TSPAN3O60637 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.71■■□□□ 1.07
TSPAN3O60637 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.71■■□□□ 1.07
TSPAN3O60637 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN3O60637 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN3O60637 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN3O60637 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
TSPAN3O60637 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
TSPAN3O60637 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN3O60637 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
TSPAN3O60637 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TSPAN3O60637 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN3O60637 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms