Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NCK2O43639 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NCK2O43639 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.26■■□□□ 1.31
NCK2O43639 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
NCK2O43639 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NCK2O43639 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NCK2O43639 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NCK2O43639 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NCK2O43639 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
NCK2O43639 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NCK2O43639 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NCK2O43639 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NCK2O43639 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
NCK2O43639 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NCK2O43639 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NCK2O43639 AC079140.4-201ENST00000507448 529 ntBASIC23.25■■□□□ 1.31
NCK2O43639 AC087239.1-201ENST00000622671 572 ntBASIC23.25■■□□□ 1.31
NCK2O43639 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NCK2O43639 AC010542.4-201ENST00000563151 1910 ntBASIC23.25■■□□□ 1.31
NCK2O43639 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NCK2O43639 FAM99A-202ENST00000538190 1989 ntBASIC23.25■■□□□ 1.31
NCK2O43639 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
NCK2O43639 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NCK2O43639 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
NCK2O43639 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NCK2O43639 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NCK2O43639 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
NCK2O43639 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.24■■□□□ 1.31
NCK2O43639 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.24■■□□□ 1.31
NCK2O43639 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NCK2O43639 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.24■■□□□ 1.31
NCK2O43639 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
NCK2O43639 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
NCK2O43639 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.24■■□□□ 1.31
NCK2O43639 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.24■■□□□ 1.31
NCK2O43639 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.24■■□□□ 1.31
NCK2O43639 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
NCK2O43639 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NCK2O43639 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NCK2O43639 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.24■■□□□ 1.31
NCK2O43639 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NCK2O43639 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NCK2O43639 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
NCK2O43639 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.23■■□□□ 1.31
NCK2O43639 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NCK2O43639 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.23■■□□□ 1.31
NCK2O43639 FAM201B-201ENST00000458407 597 ntBASIC23.23■■□□□ 1.31
NCK2O43639 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NCK2O43639 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.23■■□□□ 1.31
NCK2O43639 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
NCK2O43639 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NCK2O43639 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
NCK2O43639 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.23■■□□□ 1.31
NCK2O43639 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
NCK2O43639 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.23■■□□□ 1.31
NCK2O43639 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NCK2O43639 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NCK2O43639 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.22■■□□□ 1.31
NCK2O43639 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NCK2O43639 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NCK2O43639 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
NCK2O43639 MFSD11-216ENST00000590393 1141 ntBASIC23.22■■□□□ 1.31
NCK2O43639 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.22■■□□□ 1.31
NCK2O43639 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
NCK2O43639 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NCK2O43639 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NCK2O43639 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.22■■□□□ 1.31
NCK2O43639 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.21■■□□□ 1.31
NCK2O43639 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCK2O43639 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.21■■□□□ 1.31
NCK2O43639 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCK2O43639 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCK2O43639 SLC29A4P1-201ENST00000398760 971 ntBASIC23.21■■□□□ 1.31
NCK2O43639 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.21■■□□□ 1.31
NCK2O43639 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCK2O43639 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
NCK2O43639 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCK2O43639 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCK2O43639 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
NCK2O43639 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.21■■□□□ 1.31
NCK2O43639 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCK2O43639 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NCK2O43639 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
NCK2O43639 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCK2O43639 LINC01960-201ENST00000563759 1884 ntBASIC23.2■■□□□ 1.3
NCK2O43639 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NCK2O43639 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.2■■□□□ 1.3
NCK2O43639 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NCK2O43639 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NCK2O43639 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NCK2O43639 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.2■■□□□ 1.3
NCK2O43639 AC007322.1-201ENST00000426983 750 ntBASIC23.2■■□□□ 1.3
NCK2O43639 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.2■■□□□ 1.3
NCK2O43639 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.2■■□□□ 1.3
NCK2O43639 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.2■■□□□ 1.3
NCK2O43639 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.2■■□□□ 1.3
NCK2O43639 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.2■■□□□ 1.3
NCK2O43639 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NCK2O43639 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NCK2O43639 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms