Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PHF1O43189 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.14■□□□□ 0.49
PHF1O43189 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.14■□□□□ 0.49
PHF1O43189 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.14■□□□□ 0.49
PHF1O43189 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PHF1O43189 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PHF1O43189 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PHF1O43189 AC016769.1-201ENST00000409132 1010 ntBASIC18.14■□□□□ 0.49
PHF1O43189 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.14■□□□□ 0.49
PHF1O43189 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PHF1O43189 RAP2CP1-201ENST00000605103 478 ntBASIC18.14■□□□□ 0.49
PHF1O43189 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.14■□□□□ 0.49
PHF1O43189 AC087239.1-201ENST00000622671 572 ntBASIC18.14■□□□□ 0.49
PHF1O43189 AC073111.5-205ENST00000641717 521 ntBASIC18.14■□□□□ 0.49
PHF1O43189 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHF1O43189 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHF1O43189 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.14■□□□□ 0.49
PHF1O43189 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHF1O43189 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.13■□□□□ 0.49
PHF1O43189 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.13■□□□□ 0.49
PHF1O43189 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PHF1O43189 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.13■□□□□ 0.49
PHF1O43189 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.13■□□□□ 0.49
PHF1O43189 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PHF1O43189 CDCA4P2-201ENST00000441182 718 ntBASIC18.13■□□□□ 0.49
PHF1O43189 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.13■□□□□ 0.49
PHF1O43189 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.13■□□□□ 0.49
PHF1O43189 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.13■□□□□ 0.49
PHF1O43189 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.13■□□□□ 0.49
PHF1O43189 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 AC068587.7-201ENST00000641602 218 ntBASIC18.13■□□□□ 0.49
PHF1O43189 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.13■□□□□ 0.49
PHF1O43189 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 FAM99A-202ENST00000538190 1989 ntBASIC18.13■□□□□ 0.49
PHF1O43189 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHF1O43189 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.13■□□□□ 0.49
PHF1O43189 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.12■□□□□ 0.49
PHF1O43189 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PHF1O43189 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHF1O43189 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHF1O43189 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHF1O43189 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PHF1O43189 AC010141.3-201ENST00000456659 717 ntBASIC18.12■□□□□ 0.49
PHF1O43189 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.12■□□□□ 0.49
PHF1O43189 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.12■□□□□ 0.49
PHF1O43189 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.12■□□□□ 0.49
PHF1O43189 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHF1O43189 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHF1O43189 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PHF1O43189 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHF1O43189 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.12■□□□□ 0.49
PHF1O43189 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.12■□□□□ 0.49
PHF1O43189 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.12■□□□□ 0.49
PHF1O43189 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.12■□□□□ 0.49
PHF1O43189 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHF1O43189 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PHF1O43189 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHF1O43189 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PHF1O43189 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.11■□□□□ 0.49
PHF1O43189 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.11■□□□□ 0.49
PHF1O43189 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.11■□□□□ 0.49
PHF1O43189 AC006015.1-201ENST00000429970 570 ntBASIC18.11■□□□□ 0.49
PHF1O43189 AC026185.1-201ENST00000445748 174 ntBASIC18.11■□□□□ 0.49
PHF1O43189 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.11■□□□□ 0.49
PHF1O43189 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.11■□□□□ 0.49
PHF1O43189 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.11■□□□□ 0.49
PHF1O43189 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PHF1O43189 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.11■□□□□ 0.49
PHF1O43189 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHF1O43189 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.11■□□□□ 0.49
PHF1O43189 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHF1O43189 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PHF1O43189 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHF1O43189 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHF1O43189 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHF1O43189 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHF1O43189 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHF1O43189 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PHF1O43189 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHF1O43189 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.1■□□□□ 0.49
PHF1O43189 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.1■□□□□ 0.49
PHF1O43189 AC010542.4-201ENST00000563151 1910 ntBASIC18.1■□□□□ 0.49
PHF1O43189 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PHF1O43189 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PHF1O43189 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms