Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20■□□□□ 0.79
UPK1AO00322 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPK1AO00322 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPK1AO00322 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20■□□□□ 0.79
UPK1AO00322 MIR572-201ENST00000384983 95 ntBASIC20■□□□□ 0.79
UPK1AO00322 MIR638-201ENST00000385237 100 ntBASIC20■□□□□ 0.79
UPK1AO00322 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20■□□□□ 0.79
UPK1AO00322 AC105233.4-201ENST00000642045 216 ntBASIC20■□□□□ 0.79
UPK1AO00322 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20■□□□□ 0.79
UPK1AO00322 LINC01006-201ENST00000333319 2292 ntBASIC20■□□□□ 0.79
UPK1AO00322 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UPK1AO00322 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPK1AO00322 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UPK1AO00322 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPK1AO00322 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPK1AO00322 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.99■□□□□ 0.79
UPK1AO00322 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.99■□□□□ 0.79
UPK1AO00322 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.99■□□□□ 0.79
UPK1AO00322 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.99■□□□□ 0.79
UPK1AO00322 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPK1AO00322 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.99■□□□□ 0.79
UPK1AO00322 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPK1AO00322 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
UPK1AO00322 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPK1AO00322 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UPK1AO00322 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK1AO00322 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK1AO00322 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK1AO00322 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK1AO00322 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK1AO00322 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.98■□□□□ 0.79
UPK1AO00322 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK1AO00322 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.98■□□□□ 0.79
UPK1AO00322 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.98■□□□□ 0.79
UPK1AO00322 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK1AO00322 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK1AO00322 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK1AO00322 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
UPK1AO00322 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UPK1AO00322 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.97■□□□□ 0.79
UPK1AO00322 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.97■□□□□ 0.79
UPK1AO00322 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPK1AO00322 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPK1AO00322 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.97■□□□□ 0.79
UPK1AO00322 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.97■□□□□ 0.79
UPK1AO00322 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPK1AO00322 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.97■□□□□ 0.79
UPK1AO00322 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
UPK1AO00322 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPK1AO00322 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPK1AO00322 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPK1AO00322 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
UPK1AO00322 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UPK1AO00322 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.96■□□□□ 0.79
UPK1AO00322 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.96■□□□□ 0.79
UPK1AO00322 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.96■□□□□ 0.79
UPK1AO00322 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.96■□□□□ 0.79
UPK1AO00322 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.96■□□□□ 0.79
UPK1AO00322 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPK1AO00322 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPK1AO00322 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.96■□□□□ 0.79
UPK1AO00322 AP006587.3-201ENST00000525742 1516 ntBASIC19.96■□□□□ 0.79
UPK1AO00322 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPK1AO00322 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPK1AO00322 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPK1AO00322 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.95■□□□□ 0.78
UPK1AO00322 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPK1AO00322 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
UPK1AO00322 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.95■□□□□ 0.78
UPK1AO00322 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPK1AO00322 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPK1AO00322 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPK1AO00322 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPK1AO00322 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.95■□□□□ 0.78
UPK1AO00322 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPK1AO00322 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.95■□□□□ 0.78
UPK1AO00322 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UPK1AO00322 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.95■□□□□ 0.78
UPK1AO00322 AC003102.1-202ENST00000563394 1796 ntBASIC19.95■□□□□ 0.78
UPK1AO00322 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.94■□□□□ 0.78
UPK1AO00322 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK1AO00322 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.94■□□□□ 0.78
UPK1AO00322 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK1AO00322 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK1AO00322 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.94■□□□□ 0.78
UPK1AO00322 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.94■□□□□ 0.78
UPK1AO00322 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UPK1AO00322 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.94■□□□□ 0.78
UPK1AO00322 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK1AO00322 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK1AO00322 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK1AO00322 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.94■□□□□ 0.78
UPK1AO00322 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK1AO00322 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK1AO00322 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
UPK1AO00322 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.94■□□□□ 0.78
UPK1AO00322 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1AO00322 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
UPK1AO00322 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1AO00322 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms