Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.56■□□□□ 0.88
TAF4O00268 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.56■□□□□ 0.88
TAF4O00268 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TAF4O00268 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.56■□□□□ 0.88
TAF4O00268 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TAF4O00268 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
TAF4O00268 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.56■□□□□ 0.88
TAF4O00268 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TAF4O00268 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TAF4O00268 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TAF4O00268 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TAF4O00268 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TAF4O00268 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TAF4O00268 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.55■□□□□ 0.88
TAF4O00268 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TAF4O00268 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TAF4O00268 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TAF4O00268 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.55■□□□□ 0.88
TAF4O00268 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TAF4O00268 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TAF4O00268 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TAF4O00268 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TAF4O00268 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TAF4O00268 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.55■□□□□ 0.88
TAF4O00268 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TAF4O00268 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TAF4O00268 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TAF4O00268 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.54■□□□□ 0.88
TAF4O00268 AC128676.1-201ENST00000454392 318 ntBASIC20.54■□□□□ 0.88
TAF4O00268 UNC93B4-201ENST00000505679 747 ntBASIC20.54■□□□□ 0.88
TAF4O00268 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.54■□□□□ 0.88
TAF4O00268 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.54■□□□□ 0.88
TAF4O00268 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.54■□□□□ 0.88
TAF4O00268 AC006058.3-201ENST00000606217 1069 ntBASIC20.54■□□□□ 0.88
TAF4O00268 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.54■□□□□ 0.88
TAF4O00268 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TAF4O00268 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TAF4O00268 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TAF4O00268 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TAF4O00268 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TAF4O00268 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TAF4O00268 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.54■□□□□ 0.88
TAF4O00268 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TAF4O00268 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TAF4O00268 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TAF4O00268 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TAF4O00268 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TAF4O00268 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TAF4O00268 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.53■□□□□ 0.88
TAF4O00268 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TAF4O00268 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.53■□□□□ 0.88
TAF4O00268 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TAF4O00268 KRT87P-202ENST00000534226 1464 ntBASIC20.53■□□□□ 0.88
TAF4O00268 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.53■□□□□ 0.88
TAF4O00268 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TAF4O00268 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.53■□□□□ 0.88
TAF4O00268 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TAF4O00268 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TAF4O00268 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
TAF4O00268 ECEL1P1-201ENST00000373592 1742 ntBASIC20.53■□□□□ 0.88
TAF4O00268 LINC01529-204ENST00000636474 1715 ntBASIC20.53■□□□□ 0.88
TAF4O00268 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TAF4O00268 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.52■□□□□ 0.88
TAF4O00268 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TAF4O00268 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TAF4O00268 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.52■□□□□ 0.88
TAF4O00268 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.52■□□□□ 0.88
TAF4O00268 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TAF4O00268 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
TAF4O00268 GUSBP5-202ENST00000510805 1989 ntBASIC20.52■□□□□ 0.87
TAF4O00268 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.52■□□□□ 0.87
TAF4O00268 HLA-L-211ENST00000482052 1765 ntBASIC20.51■□□□□ 0.87
TAF4O00268 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.51■□□□□ 0.87
TAF4O00268 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TAF4O00268 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TAF4O00268 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.51■□□□□ 0.87
TAF4O00268 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.51■□□□□ 0.87
TAF4O00268 AC008550.1-201ENST00000511500 884 ntBASIC20.51■□□□□ 0.87
TAF4O00268 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TAF4O00268 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TAF4O00268 AC083880.1-201ENST00000608266 535 ntBASIC20.51■□□□□ 0.87
TAF4O00268 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.51■□□□□ 0.87
TAF4O00268 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.51■□□□□ 0.87
TAF4O00268 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TAF4O00268 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TAF4O00268 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TAF4O00268 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TAF4O00268 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TAF4O00268 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.5■□□□□ 0.87
TAF4O00268 MKRN4P-201ENST00000444706 1521 ntBASIC20.5■□□□□ 0.87
TAF4O00268 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
TAF4O00268 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TAF4O00268 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.5■□□□□ 0.87
TAF4O00268 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TAF4O00268 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.5■□□□□ 0.87
TAF4O00268 AP001160.3-201ENST00000601484 763 ntBASIC20.5■□□□□ 0.87
TAF4O00268 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.5■□□□□ 0.87
TAF4O00268 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TAF4O00268 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TAF4O00268 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms