Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM235A6NFC5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM235A6NFC5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM235A6NFC5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM235A6NFC5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM235A6NFC5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM235A6NFC5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
TMEM235A6NFC5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM235A6NFC5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM235A6NFC5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM235A6NFC5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM235A6NFC5 AC239859.2-201ENST00000444165 318 ntBASIC17.95■□□□□ 0.46
TMEM235A6NFC5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.95■□□□□ 0.46
TMEM235A6NFC5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM235A6NFC5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM235A6NFC5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM235A6NFC5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM235A6NFC5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM235A6NFC5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM235A6NFC5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM235A6NFC5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM235A6NFC5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM235A6NFC5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEM235A6NFC5 AL391422.3-201ENST00000603791 2761 ntBASIC17.94■□□□□ 0.46
TMEM235A6NFC5 AC073314.1-201ENST00000568729 2216 ntBASIC17.94■□□□□ 0.46
TMEM235A6NFC5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM235A6NFC5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
TMEM235A6NFC5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM235A6NFC5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TMEM235A6NFC5 AC010141.3-201ENST00000456659 717 ntBASIC17.94■□□□□ 0.46
TMEM235A6NFC5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM235A6NFC5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TMEM235A6NFC5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TMEM235A6NFC5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM235A6NFC5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM235A6NFC5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM235A6NFC5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM235A6NFC5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM235A6NFC5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEM235A6NFC5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.93■□□□□ 0.46
TMEM235A6NFC5 AP005212.1-201ENST00000581547 1997 ntBASIC17.93■□□□□ 0.46
TMEM235A6NFC5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM235A6NFC5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM235A6NFC5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM235A6NFC5 GABARAPL3-202ENST00000624044 1851 ntBASIC17.93■□□□□ 0.46
TMEM235A6NFC5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.93■□□□□ 0.46
TMEM235A6NFC5 PCDHAC2-203ENST00000615316 3011 ntBASIC17.93■□□□□ 0.46
TMEM235A6NFC5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM235A6NFC5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TMEM235A6NFC5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM235A6NFC5 OR2I1P-207ENST00000453522 948 ntBASIC17.93■□□□□ 0.46
TMEM235A6NFC5 AL034346.1-201ENST00000568244 1277 ntBASIC17.93■□□□□ 0.46
TMEM235A6NFC5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM235A6NFC5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.93■□□□□ 0.46
TMEM235A6NFC5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.93■□□□□ 0.46
TMEM235A6NFC5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM235A6NFC5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM235A6NFC5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM235A6NFC5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM235A6NFC5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM235A6NFC5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM235A6NFC5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TMEM235A6NFC5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TMEM235A6NFC5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.92■□□□□ 0.46
TMEM235A6NFC5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.92■□□□□ 0.46
TMEM235A6NFC5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM235A6NFC5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM235A6NFC5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.92■□□□□ 0.46
TMEM235A6NFC5 AC099791.2-201ENST00000605725 427 ntBASIC17.92■□□□□ 0.46
TMEM235A6NFC5 MIR6724-1-201ENST00000616420 92 ntBASIC17.92■□□□□ 0.46
TMEM235A6NFC5 MIR6724-2-201ENST00000616483 92 ntBASIC17.92■□□□□ 0.46
TMEM235A6NFC5 MIR6724-4-201ENST00000617390 92 ntBASIC17.92■□□□□ 0.46
TMEM235A6NFC5 MIR6724-3-201ENST00000622482 92 ntBASIC17.92■□□□□ 0.46
TMEM235A6NFC5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.92■□□□□ 0.46
TMEM235A6NFC5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.92■□□□□ 0.46
TMEM235A6NFC5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TMEM235A6NFC5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM235A6NFC5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM235A6NFC5 AC006128.1-201ENST00000624704 1661 ntBASIC17.92■□□□□ 0.46
TMEM235A6NFC5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TMEM235A6NFC5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms