Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav9d-4A0A0G2JG37 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-4A0A0G2JG37 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.73□□□□□ -0.37
Trav9d-4A0A0G2JG37 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav9d-4A0A0G2JG37 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav9d-4A0A0G2JG37 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav9d-4A0A0G2JG37 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav9d-4A0A0G2JG37 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-4A0A0G2JG37 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-4A0A0G2JG37 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-4A0A0G2JG37 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav9d-4A0A0G2JG37 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav9d-4A0A0G2JG37 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gm45141-201ENSMUST00000206502 1888 ntBASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-4A0A0G2JG37 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-4A0A0G2JG37 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-4A0A0G2JG37 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-4A0A0G2JG37 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-4A0A0G2JG37 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-4A0A0G2JG37 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-4A0A0G2JG37 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-4A0A0G2JG37 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gm15820-201ENSMUST00000201566 728 ntBASIC12.71□□□□□ -0.37
Trav9d-4A0A0G2JG37 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-4A0A0G2JG37 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9d-4A0A0G2JG37 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Trav9d-4A0A0G2JG37 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9d-4A0A0G2JG37 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9d-4A0A0G2JG37 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9d-4A0A0G2JG37 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9d-4A0A0G2JG37 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Gm10571-201ENSMUST00000097869 1638 ntBASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Dmtn-207ENSMUST00000228001 2437 ntBASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-4A0A0G2JG37 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Gm7417-201ENSMUST00000192950 473 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms