Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.14■□□□□ 0.01
TRBV25-1A0A075B6N4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV25-1A0A075B6N4 KRT16P3-201ENST00000439127 1283 ntBASIC15.14■□□□□ 0.01
TRBV25-1A0A075B6N4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRBV25-1A0A075B6N4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.14■□□□□ 0.01
TRBV25-1A0A075B6N4 AC087289.5-201ENST00000586076 3175 ntBASIC15.14■□□□□ 0.01
TRBV25-1A0A075B6N4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV25-1A0A075B6N4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
TRBV25-1A0A075B6N4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV25-1A0A075B6N4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV25-1A0A075B6N4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV25-1A0A075B6N4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV25-1A0A075B6N4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV25-1A0A075B6N4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRBV25-1A0A075B6N4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 AIRN-201ENST00000601203 4374 ntBASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 AC138932.1-201ENST00000534164 6830 ntBASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
TRBV25-1A0A075B6N4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 UNC93B8-201ENST00000511903 705 ntBASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 FEM1AP4-201ENST00000443167 1987 ntBASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV25-1A0A075B6N4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRBV25-1A0A075B6N4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV25-1A0A075B6N4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBV25-1A0A075B6N4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV25-1A0A075B6N4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV25-1A0A075B6N4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV25-1A0A075B6N4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV25-1A0A075B6N4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV25-1A0A075B6N4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV25-1A0A075B6N4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV25-1A0A075B6N4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV25-1A0A075B6N4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV25-1A0A075B6N4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 AL356740.2-201ENST00000601559 647 ntBASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 Z98882.1-201ENST00000622160 2253 ntBASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV25-1A0A075B6N4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV25-1A0A075B6N4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV25-1A0A075B6N4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV25-1A0A075B6N4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV25-1A0A075B6N4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms