Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.82■□□□□ 0.76
RNF6Q9Y252 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF6Q9Y252 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF6Q9Y252 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.82■□□□□ 0.76
RNF6Q9Y252 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF6Q9Y252 MIR6084-201ENST00000622012 110 ntBASIC19.82■□□□□ 0.76
RNF6Q9Y252 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF6Q9Y252 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF6Q9Y252 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RNF6Q9Y252 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF6Q9Y252 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF6Q9Y252 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF6Q9Y252 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
RNF6Q9Y252 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF6Q9Y252 Z98882.1-201ENST00000622160 2253 ntBASIC19.81■□□□□ 0.76
RNF6Q9Y252 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF6Q9Y252 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF6Q9Y252 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF6Q9Y252 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF6Q9Y252 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
RNF6Q9Y252 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF6Q9Y252 AC123595.1-201ENST00000440769 1046 ntBASIC19.81■□□□□ 0.76
RNF6Q9Y252 AC012414.1-201ENST00000556676 535 ntBASIC19.81■□□□□ 0.76
RNF6Q9Y252 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF6Q9Y252 RARRES2P11-201ENST00000635158 484 ntBASIC19.81■□□□□ 0.76
RNF6Q9Y252 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF6Q9Y252 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF6Q9Y252 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF6Q9Y252 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF6Q9Y252 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF6Q9Y252 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF6Q9Y252 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF6Q9Y252 AF106564.1-201ENST00000607058 2553 ntBASIC19.81■□□□□ 0.76
RNF6Q9Y252 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF6Q9Y252 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF6Q9Y252 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF6Q9Y252 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RNF6Q9Y252 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF6Q9Y252 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RNF6Q9Y252 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF6Q9Y252 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RNF6Q9Y252 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.8■□□□□ 0.76
RNF6Q9Y252 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RNF6Q9Y252 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF6Q9Y252 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF6Q9Y252 AC090192.1-201ENST00000517740 490 ntBASIC19.8■□□□□ 0.76
RNF6Q9Y252 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF6Q9Y252 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.8■□□□□ 0.76
RNF6Q9Y252 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RNF6Q9Y252 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
RNF6Q9Y252 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF6Q9Y252 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF6Q9Y252 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
RNF6Q9Y252 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF6Q9Y252 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF6Q9Y252 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF6Q9Y252 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF6Q9Y252 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF6Q9Y252 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF6Q9Y252 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RNF6Q9Y252 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
RNF6Q9Y252 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RNF6Q9Y252 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF6Q9Y252 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF6Q9Y252 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF6Q9Y252 AL499627.2-201ENST00000606283 725 ntBASIC19.79■□□□□ 0.76
RNF6Q9Y252 AL137784.2-201ENST00000607332 1000 ntBASIC19.79■□□□□ 0.76
RNF6Q9Y252 AL354811.1-201ENST00000610286 706 ntBASIC19.79■□□□□ 0.76
RNF6Q9Y252 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.79■□□□□ 0.76
RNF6Q9Y252 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF6Q9Y252 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF6Q9Y252 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF6Q9Y252 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF6Q9Y252 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF6Q9Y252 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF6Q9Y252 AL157384.1-201ENST00000445995 2473 ntBASIC19.79■□□□□ 0.76
RNF6Q9Y252 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF6Q9Y252 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF6Q9Y252 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF6Q9Y252 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF6Q9Y252 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF6Q9Y252 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF6Q9Y252 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF6Q9Y252 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF6Q9Y252 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF6Q9Y252 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF6Q9Y252 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF6Q9Y252 FEM1AP4-201ENST00000443167 1987 ntBASIC19.78■□□□□ 0.76
RNF6Q9Y252 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF6Q9Y252 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF6Q9Y252 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF6Q9Y252 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF6Q9Y252 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF6Q9Y252 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RNF6Q9Y252 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.78■□□□□ 0.76
RNF6Q9Y252 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RNF6Q9Y252 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF6Q9Y252 AC010525.1-201ENST00000585559 441 ntBASIC19.78■□□□□ 0.76
RNF6Q9Y252 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.78■□□□□ 0.76
RNF6Q9Y252 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms