Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPA1Q9UND3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.48■□□□□ 0.71
NPIPA1Q9UND3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.48■□□□□ 0.71
NPIPA1Q9UND3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.48■□□□□ 0.71
NPIPA1Q9UND3 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.48■□□□□ 0.71
NPIPA1Q9UND3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.48■□□□□ 0.71
NPIPA1Q9UND3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPA1Q9UND3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
NPIPA1Q9UND3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPA1Q9UND3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPA1Q9UND3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.48■□□□□ 0.71
NPIPA1Q9UND3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.48■□□□□ 0.71
NPIPA1Q9UND3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
NPIPA1Q9UND3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPA1Q9UND3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPA1Q9UND3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.47■□□□□ 0.71
NPIPA1Q9UND3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
NPIPA1Q9UND3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPA1Q9UND3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.47■□□□□ 0.71
NPIPA1Q9UND3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPA1Q9UND3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPA1Q9UND3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPA1Q9UND3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPA1Q9UND3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPA1Q9UND3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPA1Q9UND3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 MIR663A-201ENST00000385250 93 ntBASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 AC104771.1-201ENST00000603335 964 ntBASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 AL109923.1-201ENST00000618799 583 ntBASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPA1Q9UND3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 MFSD11-216ENST00000590393 1141 ntBASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 AP004607.7-201ENST00000527152 1677 ntBASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
NPIPA1Q9UND3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 AL355802.2-201ENST00000402069 882 ntBASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 C11orf96-202ENST00000528572 1834 ntBASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPA1Q9UND3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 AP001160.3-201ENST00000601484 763 ntBASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 UBE2DNL-204ENST00000602536 740 ntBASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms