Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 AC104187.1-201ENST00000607510 612 ntBASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 MIR5787-201ENST00000611784 55 ntBASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
PCDHA4Q9UN74 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA4Q9UN74 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA4Q9UN74 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHA4Q9UN74 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.23■■□□□ 1.47
PCDHA4Q9UN74 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.23■■□□□ 1.47
PCDHA4Q9UN74 NTF6G-201ENST00000591094 616 ntBASIC24.23■■□□□ 1.47
PCDHA4Q9UN74 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
PCDHA4Q9UN74 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA4Q9UN74 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC24.23■■□□□ 1.47
PCDHA4Q9UN74 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC24.23■■□□□ 1.47
PCDHA4Q9UN74 NARF-205ENST00000412079 1760 ntTSL 5 BASIC24.23■■□□□ 1.47
PCDHA4Q9UN74 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA4Q9UN74 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA4Q9UN74 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA4Q9UN74 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
PCDHA4Q9UN74 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
PCDHA4Q9UN74 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA4Q9UN74 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
PCDHA4Q9UN74 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA4Q9UN74 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.22■■□□□ 1.47
PCDHA4Q9UN74 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.22■■□□□ 1.47
PCDHA4Q9UN74 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA4Q9UN74 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA4Q9UN74 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA4Q9UN74 Z98882.1-201ENST00000622160 2253 ntBASIC24.22■■□□□ 1.47
PCDHA4Q9UN74 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA4Q9UN74 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
PCDHA4Q9UN74 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHA4Q9UN74 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.21■■□□□ 1.47
PCDHA4Q9UN74 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHA4Q9UN74 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
PCDHA4Q9UN74 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHA4Q9UN74 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.21■■□□□ 1.47
PCDHA4Q9UN74 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHA4Q9UN74 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHA4Q9UN74 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDHA4Q9UN74 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.21■■□□□ 1.47
PCDHA4Q9UN74 AC138907.5-202ENST00000569484 235 ntBASIC24.21■■□□□ 1.47
PCDHA4Q9UN74 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
PCDHA4Q9UN74 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.21■■□□□ 1.47
PCDHA4Q9UN74 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHA4Q9UN74 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.2■■□□□ 1.47
PCDHA4Q9UN74 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHA4Q9UN74 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHA4Q9UN74 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHA4Q9UN74 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
PCDHA4Q9UN74 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.2■■□□□ 1.46
PCDHA4Q9UN74 KRT18P5-201ENST00000436075 1291 ntBASIC24.2■■□□□ 1.46
PCDHA4Q9UN74 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHA4Q9UN74 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHA4Q9UN74 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.2■■□□□ 1.46
PCDHA4Q9UN74 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
PCDHA4Q9UN74 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
PCDHA4Q9UN74 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHA4Q9UN74 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
PCDHA4Q9UN74 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
PCDHA4Q9UN74 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
PCDHA4Q9UN74 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.19■■□□□ 1.46
PCDHA4Q9UN74 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
PCDHA4Q9UN74 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHA4Q9UN74 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.19■■□□□ 1.46
PCDHA4Q9UN74 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDHA4Q9UN74 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms