Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 AC004911.1-201ENST00000416316 871 ntBASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CUEDC1Q9NWM3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CUEDC1Q9NWM3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CUEDC1Q9NWM3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CUEDC1Q9NWM3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CUEDC1Q9NWM3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CUEDC1Q9NWM3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CUEDC1Q9NWM3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CUEDC1Q9NWM3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CUEDC1Q9NWM3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CUEDC1Q9NWM3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.43■□□□□ 0.86
CUEDC1Q9NWM3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CUEDC1Q9NWM3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CUEDC1Q9NWM3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.43■□□□□ 0.86
CUEDC1Q9NWM3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CUEDC1Q9NWM3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CUEDC1Q9NWM3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.43■□□□□ 0.86
CUEDC1Q9NWM3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CUEDC1Q9NWM3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 KRT18P61-201ENST00000585825 1298 ntBASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 KRT87P-202ENST00000534226 1464 ntBASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CUEDC1Q9NWM3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 AC004854.2-201ENST00000608450 1441 ntBASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CUEDC1Q9NWM3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CUEDC1Q9NWM3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CUEDC1Q9NWM3 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.4■□□□□ 0.86
CUEDC1Q9NWM3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.4■□□□□ 0.86
CUEDC1Q9NWM3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CUEDC1Q9NWM3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CUEDC1Q9NWM3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.4■□□□□ 0.86
CUEDC1Q9NWM3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CUEDC1Q9NWM3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms