Protein–RNA interactions for Protein: Q9H4I3

TRABD, TraB domain-containing protein, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABDQ9H4I3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRABDQ9H4I3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRABDQ9H4I3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.69■■□□□ 1.06
TRABDQ9H4I3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.69■■□□□ 1.06
TRABDQ9H4I3 MIR572-201ENST00000384983 95 ntBASIC21.69■■□□□ 1.06
TRABDQ9H4I3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.69■■□□□ 1.06
TRABDQ9H4I3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRABDQ9H4I3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.69■■□□□ 1.06
TRABDQ9H4I3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRABDQ9H4I3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TRABDQ9H4I3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
TRABDQ9H4I3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRABDQ9H4I3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRABDQ9H4I3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.69■■□□□ 1.06
TRABDQ9H4I3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TRABDQ9H4I3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRABDQ9H4I3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRABDQ9H4I3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRABDQ9H4I3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TRABDQ9H4I3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRABDQ9H4I3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
TRABDQ9H4I3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRABDQ9H4I3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.68■■□□□ 1.06
TRABDQ9H4I3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.68■■□□□ 1.06
TRABDQ9H4I3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.68■■□□□ 1.06
TRABDQ9H4I3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.68■■□□□ 1.06
TRABDQ9H4I3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRABDQ9H4I3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRABDQ9H4I3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRABDQ9H4I3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRABDQ9H4I3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRABDQ9H4I3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRABDQ9H4I3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRABDQ9H4I3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRABDQ9H4I3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRABDQ9H4I3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRABDQ9H4I3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.67■■□□□ 1.06
TRABDQ9H4I3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.67■■□□□ 1.06
TRABDQ9H4I3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.67■■□□□ 1.06
TRABDQ9H4I3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.67■■□□□ 1.06
TRABDQ9H4I3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRABDQ9H4I3 AL157384.1-201ENST00000445995 2473 ntBASIC21.67■■□□□ 1.06
TRABDQ9H4I3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TRABDQ9H4I3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.67■■□□□ 1.06
TRABDQ9H4I3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRABDQ9H4I3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRABDQ9H4I3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRABDQ9H4I3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRABDQ9H4I3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.66■■□□□ 1.06
TRABDQ9H4I3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TRABDQ9H4I3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
TRABDQ9H4I3 AL034346.1-201ENST00000568244 1277 ntBASIC21.66■■□□□ 1.06
TRABDQ9H4I3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRABDQ9H4I3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.66■■□□□ 1.06
TRABDQ9H4I3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRABDQ9H4I3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRABDQ9H4I3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.66■■□□□ 1.06
TRABDQ9H4I3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRABDQ9H4I3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRABDQ9H4I3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRABDQ9H4I3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TRABDQ9H4I3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.65■■□□□ 1.06
TRABDQ9H4I3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.65■■□□□ 1.06
TRABDQ9H4I3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRABDQ9H4I3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.65■■□□□ 1.06
TRABDQ9H4I3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TRABDQ9H4I3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRABDQ9H4I3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRABDQ9H4I3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRABDQ9H4I3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRABDQ9H4I3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRABDQ9H4I3 SMUG1P1-201ENST00000590640 811 ntBASIC21.65■■□□□ 1.06
TRABDQ9H4I3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRABDQ9H4I3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRABDQ9H4I3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.65■■□□□ 1.06
TRABDQ9H4I3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRABDQ9H4I3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRABDQ9H4I3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRABDQ9H4I3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRABDQ9H4I3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRABDQ9H4I3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.64■■□□□ 1.06
TRABDQ9H4I3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TRABDQ9H4I3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRABDQ9H4I3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRABDQ9H4I3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRABDQ9H4I3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRABDQ9H4I3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRABDQ9H4I3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRABDQ9H4I3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRABDQ9H4I3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRABDQ9H4I3 AC105265.2-201ENST00000467189 838 ntBASIC21.64■■□□□ 1.05
TRABDQ9H4I3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.64■■□□□ 1.05
TRABDQ9H4I3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.64■■□□□ 1.05
TRABDQ9H4I3 AC105233.4-201ENST00000642045 216 ntBASIC21.64■■□□□ 1.05
TRABDQ9H4I3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRABDQ9H4I3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRABDQ9H4I3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRABDQ9H4I3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.63■■□□□ 1.05
TRABDQ9H4I3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRABDQ9H4I3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms