Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
DDX47Q9H0S4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX47Q9H0S4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22■■□□□ 1.11
DDX47Q9H0S4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX47Q9H0S4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22■■□□□ 1.11
DDX47Q9H0S4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
DDX47Q9H0S4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
DDX47Q9H0S4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
DDX47Q9H0S4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX47Q9H0S4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX47Q9H0S4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22■■□□□ 1.11
DDX47Q9H0S4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX47Q9H0S4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
DDX47Q9H0S4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.99■■□□□ 1.11
DDX47Q9H0S4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
DDX47Q9H0S4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX47Q9H0S4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
DDX47Q9H0S4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX47Q9H0S4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX47Q9H0S4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX47Q9H0S4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX47Q9H0S4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DDX47Q9H0S4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.99■■□□□ 1.11
DDX47Q9H0S4 AL034346.1-201ENST00000568244 1277 ntBASIC21.99■■□□□ 1.11
DDX47Q9H0S4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
DDX47Q9H0S4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
DDX47Q9H0S4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX47Q9H0S4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX47Q9H0S4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.99■■□□□ 1.11
DDX47Q9H0S4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX47Q9H0S4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
DDX47Q9H0S4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
DDX47Q9H0S4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DDX47Q9H0S4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.98■■□□□ 1.11
DDX47Q9H0S4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX47Q9H0S4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
DDX47Q9H0S4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX47Q9H0S4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX47Q9H0S4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX47Q9H0S4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX47Q9H0S4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.98■■□□□ 1.11
DDX47Q9H0S4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.98■■□□□ 1.11
DDX47Q9H0S4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
DDX47Q9H0S4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX47Q9H0S4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.97■■□□□ 1.11
DDX47Q9H0S4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
DDX47Q9H0S4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX47Q9H0S4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
DDX47Q9H0S4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.97■■□□□ 1.11
DDX47Q9H0S4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.97■■□□□ 1.11
DDX47Q9H0S4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX47Q9H0S4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX47Q9H0S4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX47Q9H0S4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
DDX47Q9H0S4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DDX47Q9H0S4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX47Q9H0S4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX47Q9H0S4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX47Q9H0S4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX47Q9H0S4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX47Q9H0S4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX47Q9H0S4 AL356740.2-201ENST00000601559 647 ntBASIC21.96■■□□□ 1.11
DDX47Q9H0S4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.96■■□□□ 1.11
DDX47Q9H0S4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.96■■□□□ 1.11
DDX47Q9H0S4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX47Q9H0S4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX47Q9H0S4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
DDX47Q9H0S4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX47Q9H0S4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.95■■□□□ 1.11
DDX47Q9H0S4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.95■■□□□ 1.1
DDX47Q9H0S4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.95■■□□□ 1.1
DDX47Q9H0S4 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.95■■□□□ 1.1
DDX47Q9H0S4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.95■■□□□ 1.1
DDX47Q9H0S4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX47Q9H0S4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
DDX47Q9H0S4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX47Q9H0S4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX47Q9H0S4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 AL121603.2-201ENST00000557373 2117 ntBASIC21.94■■□□□ 1.1
DDX47Q9H0S4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
DDX47Q9H0S4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms