Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC097381.1-201ENST00000429019 1296 ntBASIC20.59■□□□□ 0.89
PKP4Q99569 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PKP4Q99569 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PKP4Q99569 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PKP4Q99569 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PKP4Q99569 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PKP4Q99569 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PKP4Q99569 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PKP4Q99569 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PKP4Q99569 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PKP4Q99569 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PKP4Q99569 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PKP4Q99569 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PKP4Q99569 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PKP4Q99569 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PKP4Q99569 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PKP4Q99569 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.58■□□□□ 0.89
PKP4Q99569 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
PKP4Q99569 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PKP4Q99569 MIR6821-201ENST00000617625 74 ntBASIC20.58■□□□□ 0.89
PKP4Q99569 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PKP4Q99569 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PKP4Q99569 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PKP4Q99569 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PKP4Q99569 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PKP4Q99569 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PKP4Q99569 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PKP4Q99569 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PKP4Q99569 Z98882.1-201ENST00000622160 2253 ntBASIC20.57■□□□□ 0.88
PKP4Q99569 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PKP4Q99569 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PKP4Q99569 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PKP4Q99569 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PKP4Q99569 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PKP4Q99569 EEF1DP3-203ENST00000566025 782 ntBASIC20.57■□□□□ 0.88
PKP4Q99569 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PKP4Q99569 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.57■□□□□ 0.88
PKP4Q99569 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PKP4Q99569 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.57■□□□□ 0.88
PKP4Q99569 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.57■□□□□ 0.88
PKP4Q99569 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PKP4Q99569 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.57■□□□□ 0.88
PKP4Q99569 KRT87P-202ENST00000534226 1464 ntBASIC20.56■□□□□ 0.88
PKP4Q99569 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PKP4Q99569 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.56■□□□□ 0.88
PKP4Q99569 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP4Q99569 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP4Q99569 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.56■□□□□ 0.88
PKP4Q99569 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP4Q99569 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PKP4Q99569 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP4Q99569 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP4Q99569 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.56■□□□□ 0.88
PKP4Q99569 AC026271.2-201ENST00000428091 497 ntBASIC20.56■□□□□ 0.88
PKP4Q99569 AC087623.3-201ENST00000607047 1098 ntBASIC20.56■□□□□ 0.88
PKP4Q99569 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP4Q99569 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PKP4Q99569 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP4Q99569 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP4Q99569 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PKP4Q99569 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PKP4Q99569 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP4Q99569 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP4Q99569 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PKP4Q99569 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PKP4Q99569 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.55■□□□□ 0.88
PKP4Q99569 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.55■□□□□ 0.88
PKP4Q99569 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.55■□□□□ 0.88
PKP4Q99569 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP4Q99569 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.55■□□□□ 0.88
PKP4Q99569 DUX4L2-201ENST00000561772 1275 ntBASIC20.55■□□□□ 0.88
PKP4Q99569 AC053503.5-201ENST00000601508 636 ntBASIC20.55■□□□□ 0.88
PKP4Q99569 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
PKP4Q99569 DUX4L6-201ENST00000626483 1275 ntBASIC20.55■□□□□ 0.88
PKP4Q99569 DUX4L1-201ENST00000627662 1275 ntBASIC20.55■□□□□ 0.88
PKP4Q99569 DUX4L8-201ENST00000629013 1275 ntBASIC20.55■□□□□ 0.88
PKP4Q99569 DUX4L3-201ENST00000630187 1275 ntBASIC20.55■□□□□ 0.88
PKP4Q99569 DUX4L7-201ENST00000630678 1275 ntBASIC20.55■□□□□ 0.88
PKP4Q99569 DUX4L5-201ENST00000630834 1275 ntBASIC20.55■□□□□ 0.88
PKP4Q99569 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.55■□□□□ 0.88
PKP4Q99569 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
PKP4Q99569 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP4Q99569 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP4Q99569 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
PKP4Q99569 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP4Q99569 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP4Q99569 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PKP4Q99569 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP4Q99569 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.54■□□□□ 0.88
PKP4Q99569 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PKP4Q99569 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP4Q99569 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PKP4Q99569 PKD1P6-201ENST00000343738 4769 ntBASIC20.54■□□□□ 0.88
PKP4Q99569 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP4Q99569 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP4Q99569 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.54■□□□□ 0.88
PKP4Q99569 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.54■□□□□ 0.88
PKP4Q99569 RARRES2P6-201ENST00000567333 442 ntBASIC20.54■□□□□ 0.88
PKP4Q99569 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.54■□□□□ 0.88
PKP4Q99569 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms