Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC26.35■■□□□ 1.81
CCDC85AQ96PX6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 SLC7A5P1-201ENST00000568957 537 ntBASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC85AQ96PX6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC85AQ96PX6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC85AQ96PX6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC85AQ96PX6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC85AQ96PX6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.33■■□□□ 1.81
CCDC85AQ96PX6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC26.33■■□□□ 1.81
CCDC85AQ96PX6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.33■■□□□ 1.81
CCDC85AQ96PX6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC85AQ96PX6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC85AQ96PX6 AC010542.4-201ENST00000563151 1910 ntBASIC26.33■■□□□ 1.81
CCDC85AQ96PX6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC85AQ96PX6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC85AQ96PX6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
CCDC85AQ96PX6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.33■■□□□ 1.81
CCDC85AQ96PX6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
CCDC85AQ96PX6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CCDC85AQ96PX6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
CCDC85AQ96PX6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
CCDC85AQ96PX6 AC093787.1-201ENST00000450396 207 ntBASIC26.32■■□□□ 1.8
CCDC85AQ96PX6 CD99P1-205ENST00000527459 561 ntBASIC26.32■■□□□ 1.8
CCDC85AQ96PX6 AC133552.2-202ENST00000575694 574 ntBASIC26.32■■□□□ 1.8
CCDC85AQ96PX6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CCDC85AQ96PX6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC26.32■■□□□ 1.8
CCDC85AQ96PX6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC26.32■■□□□ 1.8
CCDC85AQ96PX6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC85AQ96PX6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC85AQ96PX6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.32■■□□□ 1.8
CCDC85AQ96PX6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC26.32■■□□□ 1.8
CCDC85AQ96PX6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC85AQ96PX6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CCDC85AQ96PX6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC85AQ96PX6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC85AQ96PX6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC85AQ96PX6 AC016405.3-201ENST00000607710 860 ntBASIC26.3■■□□□ 1.8
CCDC85AQ96PX6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC85AQ96PX6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.3■■□□□ 1.8
CCDC85AQ96PX6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC85AQ96PX6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC85AQ96PX6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
CCDC85AQ96PX6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 AC127496.7-201ENST00000625110 1798 ntBASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 TSPY20P-201ENST00000450910 630 ntBASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 AC120498.10-201ENST00000621827 505 ntBASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC26.29■■□□□ 1.8
CCDC85AQ96PX6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC85AQ96PX6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.28■■□□□ 1.8
CCDC85AQ96PX6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC85AQ96PX6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC85AQ96PX6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC85AQ96PX6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC26.28■■□□□ 1.8
CCDC85AQ96PX6 KRT18P6-201ENST00000555540 1265 ntBASIC26.28■■□□□ 1.8
CCDC85AQ96PX6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC85AQ96PX6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms