Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 LINC01529-204ENST00000636474 1715 ntBASIC15.94■□□□□ 0.14
AP1S3Q96PC3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S3Q96PC3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 AC007952.6-201ENST00000573168 2673 ntBASIC15.93■□□□□ 0.14
AP1S3Q96PC3 AC003957.1-201ENST00000625108 2673 ntBASIC15.93■□□□□ 0.14
AP1S3Q96PC3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S3Q96PC3 LINC01960-201ENST00000563759 1884 ntBASIC15.93■□□□□ 0.14
AP1S3Q96PC3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.92■□□□□ 0.14
AP1S3Q96PC3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S3Q96PC3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.92■□□□□ 0.14
AP1S3Q96PC3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S3Q96PC3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
AP1S3Q96PC3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S3Q96PC3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.92■□□□□ 0.14
AP1S3Q96PC3 AC009086.3-201ENST00000623486 1008 ntBASIC15.92■□□□□ 0.14
AP1S3Q96PC3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S3Q96PC3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.92■□□□□ 0.14
AP1S3Q96PC3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.92■□□□□ 0.14
AP1S3Q96PC3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S3Q96PC3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S3Q96PC3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S3Q96PC3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S3Q96PC3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
AP1S3Q96PC3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S3Q96PC3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S3Q96PC3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
AP1S3Q96PC3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
AP1S3Q96PC3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S3Q96PC3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
AP1S3Q96PC3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
AP1S3Q96PC3 HSD17B1P1-201ENST00000590052 955 ntBASIC15.91■□□□□ 0.14
AP1S3Q96PC3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S3Q96PC3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S3Q96PC3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S3Q96PC3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 SNX5-217ENST00000606557 1087 ntBASIC15.9■□□□□ 0.14
AP1S3Q96PC3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
AP1S3Q96PC3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 ABHD17AP5-201ENST00000580133 923 ntBASIC15.89■□□□□ 0.13
AP1S3Q96PC3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms