Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SNRNP40Q96DI7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.11■□□□□ 0.65
SNRNP40Q96DI7 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.11■□□□□ 0.65
SNRNP40Q96DI7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.11■□□□□ 0.65
SNRNP40Q96DI7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.11■□□□□ 0.65
SNRNP40Q96DI7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.11■□□□□ 0.65
SNRNP40Q96DI7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.11■□□□□ 0.65
SNRNP40Q96DI7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNRNP40Q96DI7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNRNP40Q96DI7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNRNP40Q96DI7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP40Q96DI7 KRT16P2-201ENST00000414673 1423 ntBASIC19.1■□□□□ 0.65
SNRNP40Q96DI7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SNRNP40Q96DI7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.1■□□□□ 0.65
SNRNP40Q96DI7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.1■□□□□ 0.65
SNRNP40Q96DI7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.1■□□□□ 0.65
SNRNP40Q96DI7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.1■□□□□ 0.65
SNRNP40Q96DI7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SNRNP40Q96DI7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP40Q96DI7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP40Q96DI7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP40Q96DI7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRNP40Q96DI7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNRNP40Q96DI7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNRNP40Q96DI7 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.08■□□□□ 0.64
SNRNP40Q96DI7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNRNP40Q96DI7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNRNP40Q96DI7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.08■□□□□ 0.64
SNRNP40Q96DI7 AC026366.1-201ENST00000488803 879 ntBASIC19.08■□□□□ 0.64
SNRNP40Q96DI7 UNC93B5-201ENST00000530315 699 ntBASIC19.08■□□□□ 0.64
SNRNP40Q96DI7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.08■□□□□ 0.64
SNRNP40Q96DI7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNRNP40Q96DI7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.08■□□□□ 0.64
SNRNP40Q96DI7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNRNP40Q96DI7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNRNP40Q96DI7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 UNC93B4-201ENST00000505679 747 ntBASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 AC243732.1-201ENST00000612648 864 ntBASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.07■□□□□ 0.64
SNRNP40Q96DI7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNRNP40Q96DI7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRNP40Q96DI7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRNP40Q96DI7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.06■□□□□ 0.64
SNRNP40Q96DI7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNRNP40Q96DI7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRNP40Q96DI7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNRNP40Q96DI7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SNRNP40Q96DI7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.06■□□□□ 0.64
SNRNP40Q96DI7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SNRNP40Q96DI7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRNP40Q96DI7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRNP40Q96DI7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.06■□□□□ 0.64
SNRNP40Q96DI7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRNP40Q96DI7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRNP40Q96DI7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms