Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RTF1Q92541 AC242852.2-201ENST00000615738 1807 ntBASIC27.67■■■□□ 2.02
RTF1Q92541 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
RTF1Q92541 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RTF1Q92541 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RTF1Q92541 BMP1-204ENST00000397814 836 ntTSL 4 BASIC27.67■■■□□ 2.02
RTF1Q92541 CNN2P6-201ENST00000439038 900 ntBASIC27.67■■■□□ 2.02
RTF1Q92541 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC27.67■■■□□ 2.02
RTF1Q92541 WT1-AS_3.1-201ENST00000613262 234 ntBASIC27.67■■■□□ 2.02
RTF1Q92541 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RTF1Q92541 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
RTF1Q92541 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC27.67■■■□□ 2.02
RTF1Q92541 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
RTF1Q92541 AC233723.2-201ENST00000623798 2106 ntBASIC27.67■■■□□ 2.02
RTF1Q92541 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RTF1Q92541 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RTF1Q92541 TERF1P5-201ENST00000477545 1207 ntBASIC27.66■■■□□ 2.02
RTF1Q92541 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC27.66■■■□□ 2.02
RTF1Q92541 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC27.66■■■□□ 2.02
RTF1Q92541 AC104771.1-201ENST00000603335 964 ntBASIC27.66■■■□□ 2.02
RTF1Q92541 AL109923.1-201ENST00000618799 583 ntBASIC27.66■■■□□ 2.02
RTF1Q92541 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC27.66■■■□□ 2.02
RTF1Q92541 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC27.66■■■□□ 2.02
RTF1Q92541 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
RTF1Q92541 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RTF1Q92541 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RTF1Q92541 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC27.66■■■□□ 2.02
RTF1Q92541 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RTF1Q92541 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
RTF1Q92541 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC27.65■■■□□ 2.02
RTF1Q92541 AC010542.4-201ENST00000563151 1910 ntBASIC27.65■■■□□ 2.02
RTF1Q92541 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC27.65■■■□□ 2.02
RTF1Q92541 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC27.65■■■□□ 2.02
RTF1Q92541 GPX1P1-201ENST00000388829 606 ntBASIC27.65■■■□□ 2.02
RTF1Q92541 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC27.65■■■□□ 2.02
RTF1Q92541 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC27.65■■■□□ 2.02
RTF1Q92541 AL050303.2-201ENST00000619798 666 ntBASIC27.65■■■□□ 2.02
RTF1Q92541 AC013268.1-206ENST00000638368 961 ntBASIC27.65■■■□□ 2.02
RTF1Q92541 AC112229.1-201ENST00000639295 961 ntBASIC27.65■■■□□ 2.02
RTF1Q92541 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC27.65■■■□□ 2.02
RTF1Q92541 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC27.65■■■□□ 2.02
RTF1Q92541 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
RTF1Q92541 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC27.65■■■□□ 2.02
RTF1Q92541 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RTF1Q92541 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC27.65■■■□□ 2.02
RTF1Q92541 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
RTF1Q92541 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
RTF1Q92541 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
RTF1Q92541 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
RTF1Q92541 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC27.64■■■□□ 2.02
RTF1Q92541 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC27.64■■■□□ 2.02
RTF1Q92541 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
RTF1Q92541 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
RTF1Q92541 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC27.64■■■□□ 2.01
RTF1Q92541 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
RTF1Q92541 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
RTF1Q92541 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC27.64■■■□□ 2.01
RTF1Q92541 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RTF1Q92541 AC068473.5-201ENST00000616428 2072 ntBASIC27.63■■■□□ 2.01
RTF1Q92541 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC27.63■■■□□ 2.01
RTF1Q92541 GUSBP5-202ENST00000510805 1989 ntBASIC27.63■■■□□ 2.01
RTF1Q92541 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC27.63■■■□□ 2.01
RTF1Q92541 AC061975.6-201ENST00000579045 1553 ntBASIC27.63■■■□□ 2.01
RTF1Q92541 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
RTF1Q92541 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RTF1Q92541 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC27.62■■■□□ 2.01
RTF1Q92541 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
RTF1Q92541 KRT16P2-201ENST00000414673 1423 ntBASIC27.62■■■□□ 2.01
RTF1Q92541 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
RTF1Q92541 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC27.62■■■□□ 2.01
RTF1Q92541 AL121832.2-201ENST00000610979 668 ntBASIC27.62■■■□□ 2.01
RTF1Q92541 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
RTF1Q92541 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
RTF1Q92541 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
RTF1Q92541 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
RTF1Q92541 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
RTF1Q92541 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
RTF1Q92541 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
RTF1Q92541 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
RTF1Q92541 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC27.61■■■□□ 2.01
RTF1Q92541 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
RTF1Q92541 UQCRFS1P1-201ENST00000435169 820 ntBASIC27.61■■■□□ 2.01
RTF1Q92541 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC27.61■■■□□ 2.01
RTF1Q92541 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
RTF1Q92541 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
RTF1Q92541 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
RTF1Q92541 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC27.61■■■□□ 2.01
RTF1Q92541 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC27.61■■■□□ 2.01
RTF1Q92541 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RTF1Q92541 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC27.6■■■□□ 2.01
RTF1Q92541 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RTF1Q92541 AC083906.2-201ENST00000511578 360 ntBASIC27.6■■■□□ 2.01
RTF1Q92541 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC27.6■■■□□ 2.01
RTF1Q92541 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC27.6■■■□□ 2.01
RTF1Q92541 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC27.6■■■□□ 2.01
RTF1Q92541 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RTF1Q92541 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
RTF1Q92541 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RTF1Q92541 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC27.59■■■□□ 2.01
RTF1Q92541 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms