Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 ID1-201ENST00000376105 1233 ntBASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 AC006970.2-201ENST00000450065 779 ntBASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SCN4BQ8IWT1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
SCN4BQ8IWT1 AC010542.4-201ENST00000563151 1910 ntBASIC22.33■■□□□ 1.16
SCN4BQ8IWT1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.33■■□□□ 1.16
SCN4BQ8IWT1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
SCN4BQ8IWT1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.33■■□□□ 1.16
SCN4BQ8IWT1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.33■■□□□ 1.16
SCN4BQ8IWT1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 CROCCP5-201ENST00000436658 830 ntBASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 DUX4L16-201ENST00000555130 1264 ntBASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN4BQ8IWT1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SCN4BQ8IWT1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SCN4BQ8IWT1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.31■■□□□ 1.16
SCN4BQ8IWT1 MIR663A-201ENST00000385250 93 ntBASIC22.31■■□□□ 1.16
SCN4BQ8IWT1 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.31■■□□□ 1.16
SCN4BQ8IWT1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.31■■□□□ 1.16
SCN4BQ8IWT1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.31■■□□□ 1.16
SCN4BQ8IWT1 AC120498.10-201ENST00000621827 505 ntBASIC22.31■■□□□ 1.16
SCN4BQ8IWT1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SCN4BQ8IWT1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SCN4BQ8IWT1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SCN4BQ8IWT1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.3■■□□□ 1.16
SCN4BQ8IWT1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
SCN4BQ8IWT1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SCN4BQ8IWT1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
SCN4BQ8IWT1 AC007322.1-201ENST00000426983 750 ntBASIC22.3■■□□□ 1.16
SCN4BQ8IWT1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.3■■□□□ 1.16
SCN4BQ8IWT1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SCN4BQ8IWT1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.3■■□□□ 1.16
SCN4BQ8IWT1 AC010536.3-201ENST00000620306 533 ntBASIC22.3■■□□□ 1.16
SCN4BQ8IWT1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
SCN4BQ8IWT1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SCN4BQ8IWT1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SCN4BQ8IWT1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SCN4BQ8IWT1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SCN4BQ8IWT1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SCN4BQ8IWT1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SCN4BQ8IWT1 HLA-L-209ENST00000420110 1011 ntBASIC22.29■■□□□ 1.16
SCN4BQ8IWT1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.29■■□□□ 1.16
SCN4BQ8IWT1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.29■■□□□ 1.16
SCN4BQ8IWT1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.29■■□□□ 1.16
SCN4BQ8IWT1 AC231657.2-201ENST00000624556 255 ntBASIC22.29■■□□□ 1.16
SCN4BQ8IWT1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SCN4BQ8IWT1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SCN4BQ8IWT1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SCN4BQ8IWT1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SCN4BQ8IWT1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.29■■□□□ 1.16
SCN4BQ8IWT1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.28■■□□□ 1.16
SCN4BQ8IWT1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCN4BQ8IWT1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SCN4BQ8IWT1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCN4BQ8IWT1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.28■■□□□ 1.16
SCN4BQ8IWT1 POU5F1P4-201ENST00000413175 1085 ntBASIC22.28■■□□□ 1.16
SCN4BQ8IWT1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.28■■□□□ 1.16
SCN4BQ8IWT1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCN4BQ8IWT1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SCN4BQ8IWT1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCN4BQ8IWT1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.28■■□□□ 1.16
SCN4BQ8IWT1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SCN4BQ8IWT1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms