Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.33■■□□□ 1.49
SH3RF1Q7Z6J0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.33■■□□□ 1.49
SH3RF1Q7Z6J0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.33■■□□□ 1.49
SH3RF1Q7Z6J0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SH3RF1Q7Z6J0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
SH3RF1Q7Z6J0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.33■■□□□ 1.48
SH3RF1Q7Z6J0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SH3RF1Q7Z6J0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.32■■□□□ 1.48
SH3RF1Q7Z6J0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.32■■□□□ 1.48
SH3RF1Q7Z6J0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SH3RF1Q7Z6J0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.32■■□□□ 1.48
SH3RF1Q7Z6J0 GUSBP6-202ENST00000438529 1198 ntBASIC24.32■■□□□ 1.48
SH3RF1Q7Z6J0 AL138781.1-201ENST00000566567 1274 ntBASIC24.32■■□□□ 1.48
SH3RF1Q7Z6J0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.32■■□□□ 1.48
SH3RF1Q7Z6J0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.32■■□□□ 1.48
SH3RF1Q7Z6J0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.32■■□□□ 1.48
SH3RF1Q7Z6J0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.32■■□□□ 1.48
SH3RF1Q7Z6J0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SH3RF1Q7Z6J0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.31■■□□□ 1.48
SH3RF1Q7Z6J0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH3RF1Q7Z6J0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH3RF1Q7Z6J0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
SH3RF1Q7Z6J0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SH3RF1Q7Z6J0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SH3RF1Q7Z6J0 AC079089.2-201ENST00000531211 1277 ntBASIC24.31■■□□□ 1.48
SH3RF1Q7Z6J0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.31■■□□□ 1.48
SH3RF1Q7Z6J0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SH3RF1Q7Z6J0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SH3RF1Q7Z6J0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH3RF1Q7Z6J0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SH3RF1Q7Z6J0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.3■■□□□ 1.48
SH3RF1Q7Z6J0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.3■■□□□ 1.48
SH3RF1Q7Z6J0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.3■■□□□ 1.48
SH3RF1Q7Z6J0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SH3RF1Q7Z6J0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH3RF1Q7Z6J0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.3■■□□□ 1.48
SH3RF1Q7Z6J0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 SMUG1P1-201ENST00000590640 811 ntBASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 FAM99A-202ENST00000538190 1989 ntBASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SH3RF1Q7Z6J0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SH3RF1Q7Z6J0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SH3RF1Q7Z6J0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SH3RF1Q7Z6J0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SH3RF1Q7Z6J0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.28■■□□□ 1.48
SH3RF1Q7Z6J0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SH3RF1Q7Z6J0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.28■■□□□ 1.48
SH3RF1Q7Z6J0 SLC7A5P2-201ENST00000553010 536 ntBASIC24.28■■□□□ 1.48
SH3RF1Q7Z6J0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SH3RF1Q7Z6J0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
SH3RF1Q7Z6J0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.28■■□□□ 1.48
SH3RF1Q7Z6J0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SH3RF1Q7Z6J0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
SH3RF1Q7Z6J0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
SH3RF1Q7Z6J0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
SH3RF1Q7Z6J0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SH3RF1Q7Z6J0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
SH3RF1Q7Z6J0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SH3RF1Q7Z6J0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.27■■□□□ 1.48
SH3RF1Q7Z6J0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.27■■□□□ 1.48
SH3RF1Q7Z6J0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.27■■□□□ 1.48
SH3RF1Q7Z6J0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.27■■□□□ 1.48
SH3RF1Q7Z6J0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.27■■□□□ 1.48
SH3RF1Q7Z6J0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
SH3RF1Q7Z6J0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.27■■□□□ 1.48
SH3RF1Q7Z6J0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SH3RF1Q7Z6J0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms