Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 AL139246.5-201ENST00000606645 996 ntBASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 AC105233.4-201ENST00000642045 216 ntBASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.5■□□□□ 0.39
FAM53AQ6NSI3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.5■□□□□ 0.39
FAM53AQ6NSI3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM53AQ6NSI3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM53AQ6NSI3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
FAM53AQ6NSI3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.5■□□□□ 0.39
FAM53AQ6NSI3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.5■□□□□ 0.39
FAM53AQ6NSI3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.5■□□□□ 0.39
FAM53AQ6NSI3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.5■□□□□ 0.39
FAM53AQ6NSI3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.5■□□□□ 0.39
FAM53AQ6NSI3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.5■□□□□ 0.39
FAM53AQ6NSI3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FAM53AQ6NSI3 RASA4CP-201ENST00000424092 1398 ntBASIC17.5■□□□□ 0.39
FAM53AQ6NSI3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM53AQ6NSI3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM53AQ6NSI3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.5■□□□□ 0.39
FAM53AQ6NSI3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 AL034346.1-201ENST00000568244 1277 ntBASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM53AQ6NSI3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
FAM53AQ6NSI3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 AC091305.1-201ENST00000479476 895 ntBASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM53AQ6NSI3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM53AQ6NSI3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms