Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC24.51■■□□□ 1.51
KRT40Q6A162 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
KRT40Q6A162 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
KRT40Q6A162 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.51■■□□□ 1.51
KRT40Q6A162 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
KRT40Q6A162 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
KRT40Q6A162 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
KRT40Q6A162 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
KRT40Q6A162 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
KRT40Q6A162 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
KRT40Q6A162 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
KRT40Q6A162 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
KRT40Q6A162 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.5■■□□□ 1.51
KRT40Q6A162 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
KRT40Q6A162 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.5■■□□□ 1.51
KRT40Q6A162 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
KRT40Q6A162 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.5■■□□□ 1.51
KRT40Q6A162 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
KRT40Q6A162 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
KRT40Q6A162 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
KRT40Q6A162 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.49■■□□□ 1.51
KRT40Q6A162 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.49■■□□□ 1.51
KRT40Q6A162 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
KRT40Q6A162 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
KRT40Q6A162 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
KRT40Q6A162 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.49■■□□□ 1.51
KRT40Q6A162 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
KRT40Q6A162 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.49■■□□□ 1.51
KRT40Q6A162 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.49■■□□□ 1.51
KRT40Q6A162 AL354811.1-201ENST00000610286 706 ntBASIC24.49■■□□□ 1.51
KRT40Q6A162 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.49■■□□□ 1.51
KRT40Q6A162 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.49■■□□□ 1.51
KRT40Q6A162 MIR6084-201ENST00000622012 110 ntBASIC24.49■■□□□ 1.51
KRT40Q6A162 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.49■■□□□ 1.51
KRT40Q6A162 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.49■■□□□ 1.51
KRT40Q6A162 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
KRT40Q6A162 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
KRT40Q6A162 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.49■■□□□ 1.51
KRT40Q6A162 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
KRT40Q6A162 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
KRT40Q6A162 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
KRT40Q6A162 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
KRT40Q6A162 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
KRT40Q6A162 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.48■■□□□ 1.51
KRT40Q6A162 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
KRT40Q6A162 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
KRT40Q6A162 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
KRT40Q6A162 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
KRT40Q6A162 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.48■■□□□ 1.51
KRT40Q6A162 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
KRT40Q6A162 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
KRT40Q6A162 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.47■■□□□ 1.51
KRT40Q6A162 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
KRT40Q6A162 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
KRT40Q6A162 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
KRT40Q6A162 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
KRT40Q6A162 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.47■■□□□ 1.51
KRT40Q6A162 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
KRT40Q6A162 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
KRT40Q6A162 HLA-L-209ENST00000420110 1011 ntBASIC24.47■■□□□ 1.51
KRT40Q6A162 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.47■■□□□ 1.51
KRT40Q6A162 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.47■■□□□ 1.51
KRT40Q6A162 TPRG1LP1-201ENST00000598702 760 ntBASIC24.47■■□□□ 1.51
KRT40Q6A162 AL358852.1-201ENST00000623174 1268 ntBASIC24.47■■□□□ 1.51
KRT40Q6A162 AC005229.4-201ENST00000610085 2198 ntBASIC24.47■■□□□ 1.51
KRT40Q6A162 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
KRT40Q6A162 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
KRT40Q6A162 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.46■■□□□ 1.51
KRT40Q6A162 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
KRT40Q6A162 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
KRT40Q6A162 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
KRT40Q6A162 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.46■■□□□ 1.51
KRT40Q6A162 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
KRT40Q6A162 FEM1AP4-201ENST00000443167 1987 ntBASIC24.46■■□□□ 1.51
KRT40Q6A162 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
KRT40Q6A162 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.46■■□□□ 1.51
KRT40Q6A162 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.46■■□□□ 1.51
KRT40Q6A162 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
KRT40Q6A162 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
KRT40Q6A162 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
KRT40Q6A162 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
KRT40Q6A162 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
KRT40Q6A162 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
KRT40Q6A162 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
KRT40Q6A162 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.46■■□□□ 1.51
KRT40Q6A162 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
KRT40Q6A162 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC24.46■■□□□ 1.51
KRT40Q6A162 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
KRT40Q6A162 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.45■■□□□ 1.51
KRT40Q6A162 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
KRT40Q6A162 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
KRT40Q6A162 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.45■■□□□ 1.5
KRT40Q6A162 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.45■■□□□ 1.5
KRT40Q6A162 DYM-203ENST00000442713 2147 ntTSL 2 BASIC24.45■■□□□ 1.5
KRT40Q6A162 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
KRT40Q6A162 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.45■■□□□ 1.5
KRT40Q6A162 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
KRT40Q6A162 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
KRT40Q6A162 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
KRT40Q6A162 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms