Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC11.5□□□□□ -0.57
RNF213Q63HN8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC11.5□□□□□ -0.57
RNF213Q63HN8 MTDHP1-201ENST00000605323 784 ntBASIC11.5□□□□□ -0.57
RNF213Q63HN8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF213Q63HN8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC11.5□□□□□ -0.57
RNF213Q63HN8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RNF213Q63HN8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC11.5□□□□□ -0.57
RNF213Q63HN8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RNF213Q63HN8 AL023875.1-201ENST00000640777 796 ntBASIC11.5□□□□□ -0.57
RNF213Q63HN8 RBM17P2-201ENST00000616397 1405 ntBASIC11.5□□□□□ -0.57
RNF213Q63HN8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RNF213Q63HN8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RNF213Q63HN8 AL137013.1-201ENST00000432946 1228 ntBASIC11.49□□□□□ -0.57
RNF213Q63HN8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC11.49□□□□□ -0.57
RNF213Q63HN8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RNF213Q63HN8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
RNF213Q63HN8 OXCT2P1-201ENST00000447263 1535 ntBASIC11.49□□□□□ -0.57
RNF213Q63HN8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RNF213Q63HN8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RNF213Q63HN8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC11.49□□□□□ -0.57
RNF213Q63HN8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC11.49□□□□□ -0.57
RNF213Q63HN8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC11.49□□□□□ -0.57
RNF213Q63HN8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RNF213Q63HN8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC11.49□□□□□ -0.57
RNF213Q63HN8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RNF213Q63HN8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC11.49□□□□□ -0.57
RNF213Q63HN8 AC026471.5-201ENST00000615068 467 ntBASIC11.49□□□□□ -0.57
RNF213Q63HN8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RNF213Q63HN8 LINC01529-204ENST00000636474 1715 ntBASIC11.49□□□□□ -0.57
RNF213Q63HN8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RNF213Q63HN8 CLEC4GP1-201ENST00000596555 870 ntBASIC11.49□□□□□ -0.57
RNF213Q63HN8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RNF213Q63HN8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RNF213Q63HN8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RNF213Q63HN8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RNF213Q63HN8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RNF213Q63HN8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC11.48□□□□□ -0.57
RNF213Q63HN8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RNF213Q63HN8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RNF213Q63HN8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RNF213Q63HN8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC11.48□□□□□ -0.57
RNF213Q63HN8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RNF213Q63HN8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC11.48□□□□□ -0.57
RNF213Q63HN8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC11.48□□□□□ -0.57
RNF213Q63HN8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC11.48□□□□□ -0.57
RNF213Q63HN8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RNF213Q63HN8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RNF213Q63HN8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC11.48□□□□□ -0.57
RNF213Q63HN8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
RNF213Q63HN8 WWOX-216ENST00000569818 525 ntBASIC11.48□□□□□ -0.57
RNF213Q63HN8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RNF213Q63HN8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC11.48□□□□□ -0.57
RNF213Q63HN8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.48□□□□□ -0.57
RNF213Q63HN8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.48□□□□□ -0.57
RNF213Q63HN8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
RNF213Q63HN8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
RNF213Q63HN8 KRT18P22-201ENST00000402024 1347 ntBASIC11.48□□□□□ -0.57
RNF213Q63HN8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF213Q63HN8 SAPCD2P4-201ENST00000424595 1171 ntBASIC11.47□□□□□ -0.57
RNF213Q63HN8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RNF213Q63HN8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
RNF213Q63HN8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.47□□□□□ -0.57
RNF213Q63HN8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC11.47□□□□□ -0.57
RNF213Q63HN8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC11.47□□□□□ -0.57
RNF213Q63HN8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF213Q63HN8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF213Q63HN8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF213Q63HN8 AC092803.2-201ENST00000564287 1899 ntBASIC11.47□□□□□ -0.57
RNF213Q63HN8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
RNF213Q63HN8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF213Q63HN8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC11.47□□□□□ -0.57
RNF213Q63HN8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC11.47□□□□□ -0.57
RNF213Q63HN8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC11.47□□□□□ -0.57
RNF213Q63HN8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC11.47□□□□□ -0.57
RNF213Q63HN8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
RNF213Q63HN8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF213Q63HN8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
RNF213Q63HN8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF213Q63HN8 SLC25A3P1-201ENST00000443844 931 ntBASIC11.47□□□□□ -0.57
RNF213Q63HN8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC11.47□□□□□ -0.57
RNF213Q63HN8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.47□□□□□ -0.57
RNF213Q63HN8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC11.47□□□□□ -0.57
RNF213Q63HN8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC11.47□□□□□ -0.57
RNF213Q63HN8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF213Q63HN8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RNF213Q63HN8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RNF213Q63HN8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RNF213Q63HN8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RNF213Q63HN8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RNF213Q63HN8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RNF213Q63HN8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RNF213Q63HN8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RNF213Q63HN8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RNF213Q63HN8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC11.46□□□□□ -0.57
RNF213Q63HN8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
RNF213Q63HN8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
RNF213Q63HN8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
RNF213Q63HN8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC11.46□□□□□ -0.57
RNF213Q63HN8 HES2-206ENST00000489730 730 ntTSL 2 BASIC11.46□□□□□ -0.57
RNF213Q63HN8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms