Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 CTK1YKL139W 1587 nt2.26□□□□□ -2.05
HRD1Q08109 SEC59YMR013C 1560 nt2.26□□□□□ -2.05
HRD1Q08109 ORC2YBR060C 1863 nt2.26□□□□□ -2.05
HRD1Q08109 GYL1YMR192W 2163 nt2.26□□□□□ -2.05
HRD1Q08109 CSF1YLR087C 8877 nt2.25□□□□□ -2.05
HRD1Q08109 RDI1YDL135C 609 nt2.25□□□□□ -2.05
HRD1Q08109 YLR012CYLR012C 300 nt2.25□□□□□ -2.05
HRD1Q08109 YLR076CYLR076C 423 nt2.25□□□□□ -2.05
HRD1Q08109 SYC1YOR179C 567 nt2.25□□□□□ -2.05
HRD1Q08109 GIN4YDR507C 3429 nt2.25□□□□□ -2.05
HRD1Q08109 ECM18YDR125C 1362 nt2.24□□□□□ -2.05
HRD1Q08109 YKL100CYKL100C 1764 nt2.24□□□□□ -2.05
HRD1Q08109 PEX21YGR239C 867 nt2.24□□□□□ -2.05
HRD1Q08109 TCD1YHR003C 1290 nt2.24□□□□□ -2.05
HRD1Q08109 YIL054WYIL054W 318 nt2.24□□□□□ -2.05
HRD1Q08109 VMA5YKL080W 1179 nt2.24□□□□□ -2.05
HRD1Q08109 DAD2YKR083C 402 nt2.24□□□□□ -2.05
HRD1Q08109 YAR075WYAR075W 474 nt2.24□□□□□ -2.05
HRD1Q08109 HSH49YOR319W 642 nt2.24□□□□□ -2.05
HRD1Q08109 NAB3YPL190C 2409 nt2.24□□□□□ -2.05
HRD1Q08109 VAC14YLR386W 2643 nt2.24□□□□□ -2.05
HRD1Q08109 YHR078WYHR078W 1659 nt2.24□□□□□ -2.05
HRD1Q08109 UBP15YMR304W 3693 nt2.23□□□□□ -2.05
HRD1Q08109 SRO77YBL106C 3033 nt2.23□□□□□ -2.05
HRD1Q08109 YER079C-AYER079C-A 339 nt2.23□□□□□ -2.05
HRD1Q08109 JIP3YLR331C 378 nt2.23□□□□□ -2.05
HRD1Q08109 ILV5YLR355C 1188 nt2.23□□□□□ -2.05
HRD1Q08109 YML037CYML037C 1023 nt2.23□□□□□ -2.05
HRD1Q08109 YNL144W-AYNL144W-A 84 nt2.23□□□□□ -2.05
HRD1Q08109 CTM1YHR109W 1758 nt2.23□□□□□ -2.05
HRD1Q08109 SLP1YOR154W 1764 nt2.23□□□□□ -2.05
HRD1Q08109 CLB5YPR120C 1308 nt2.22□□□□□ -2.05
HRD1Q08109 ABD1YBR236C 1311 nt2.22□□□□□ -2.05
HRD1Q08109 BSC2YDR275W 708 nt2.22□□□□□ -2.05
HRD1Q08109 YDR535CYDR535C 501 nt2.22□□□□□ -2.05
HRD1Q08109 YIP5YGL161C 933 nt2.22□□□□□ -2.05
HRD1Q08109 YGR039WYGR039W 312 nt2.22□□□□□ -2.05
HRD1Q08109 YKL071WYKL071W 771 nt2.22□□□□□ -2.05
HRD1Q08109 YLR339CYLR339C 552 nt2.22□□□□□ -2.05
HRD1Q08109 YBL081WYBL081W 1107 nt2.22□□□□□ -2.05
HRD1Q08109 SPH1YLR313C 1593 nt2.22□□□□□ -2.05
HRD1Q08109 ORC1YML065W 2745 nt2.22□□□□□ -2.05
HRD1Q08109 PIN4YBL051C 2007 nt2.22□□□□□ -2.05
HRD1Q08109 ITT1YML068W 1395 nt2.22□□□□□ -2.05
HRD1Q08109 YPL150WYPL150W 2706 nt2.21□□□□□ -2.06
HRD1Q08109 HFM1YGL251C 3564 nt2.21□□□□□ -2.06
HRD1Q08109 PRP18YGR006W 756 nt2.21□□□□□ -2.06
HRD1Q08109 EAP1YKL204W 1899 nt2.21□□□□□ -2.06
HRD1Q08109 snR11snR11 258 nt2.21□□□□□ -2.06
HRD1Q08109 YBR085C-AYBR085C-A 258 nt2.21□□□□□ -2.06
HRD1Q08109 RLI1YDR091C 1827 nt2.21□□□□□ -2.06
HRD1Q08109 YDR261W-BYDR261W-B 5313 nt2.21□□□□□ -2.06
HRD1Q08109 YFL002W-AYFL002W-A 5313 nt2.21□□□□□ -2.06
HRD1Q08109 YGR161W-BYGR161W-B 5313 nt2.21□□□□□ -2.06
HRD1Q08109 YCL019WYCL019W 5313 nt2.21□□□□□ -2.06
HRD1Q08109 YDL199CYDL199C 2064 nt2.21□□□□□ -2.06
HRD1Q08109 AEP3YPL005W 1821 nt2.2□□□□□ -2.06
HRD1Q08109 RPL24BYGR148C 468 nt2.2□□□□□ -2.06
HRD1Q08109 YKL156C-AYKL156C-A 117 nt2.2□□□□□ -2.06
HRD1Q08109 MSA1YOR066W 1890 nt2.2□□□□□ -2.06
HRD1Q08109 BNI4YNL233W 2679 nt2.19□□□□□ -2.06
HRD1Q08109 NFI1YOR156C 2181 nt2.19□□□□□ -2.06
HRD1Q08109 VHR1YIL056W 1923 nt2.19□□□□□ -2.06
HRD1Q08109 YCL076WYCL076W 744 nt2.19□□□□□ -2.06
HRD1Q08109 NSA2YER126C 786 nt2.19□□□□□ -2.06
HRD1Q08109 SOL3YHR163W 750 nt2.19□□□□□ -2.06
HRD1Q08109 YKR075CYKR075C 924 nt2.19□□□□□ -2.06
HRD1Q08109 RPL8BYLL045C 771 nt2.19□□□□□ -2.06
HRD1Q08109 YOR062CYOR062C 807 nt2.19□□□□□ -2.06
HRD1Q08109 YPK1YKL126W 2043 nt2.18□□□□□ -2.06
HRD1Q08109 RED1YLR263W 2484 nt2.18□□□□□ -2.06
HRD1Q08109 SUL1YBR294W 2580 nt2.18□□□□□ -2.06
HRD1Q08109 YBT1YLL048C 4986 nt2.18□□□□□ -2.06
HRD1Q08109 AVT2YEL064C 1443 nt2.18□□□□□ -2.06
HRD1Q08109 NEW1YPL226W 3591 nt2.18□□□□□ -2.06
HRD1Q08109 KRE33YNL132W 3171 nt2.18□□□□□ -2.06
HRD1Q08109 YDL050CYDL050C 372 nt2.18□□□□□ -2.06
HRD1Q08109 YKL033W-AYKL033W-A 711 nt2.18□□□□□ -2.06
HRD1Q08109 YLR444CYLR444C 303 nt2.18□□□□□ -2.06
HRD1Q08109 COX14YML129C 213 nt2.18□□□□□ -2.06
HRD1Q08109 YMR187CYMR187C 1296 nt2.18□□□□□ -2.06
HRD1Q08109 YNL043CYNL043C 321 nt2.18□□□□□ -2.06
HRD1Q08109 RPL23AYBL087C 414 nt2.18□□□□□ -2.06
HRD1Q08109 RRD2YPL152W 1077 nt2.18□□□□□ -2.06
HRD1Q08109 MRD1YPR112C 2664 nt2.18□□□□□ -2.06
HRD1Q08109 TOF1YNL273W 3717 nt2.17□□□□□ -2.06
HRD1Q08109 SPF1YEL031W 3648 nt2.17□□□□□ -2.06
HRD1Q08109 YER066C-AYER066C-A 501 nt2.17□□□□□ -2.06
HRD1Q08109 YGL063C-AYGL063C-A 150 nt2.17□□□□□ -2.06
HRD1Q08109 MMS2YGL087C 414 nt2.17□□□□□ -2.06
HRD1Q08109 MIC27YNL100W 705 nt2.17□□□□□ -2.06
HRD1Q08109 THI80YOR143C 960 nt2.17□□□□□ -2.06
HRD1Q08109 COA2YPL189C-A 207 nt2.17□□□□□ -2.06
HRD1Q08109 JID1YPR061C 906 nt2.17□□□□□ -2.06
HRD1Q08109 DAD3YBR233W-A 285 nt2.17□□□□□ -2.06
HRD1Q08109 CLG1YGL215W 1359 nt2.17□□□□□ -2.06
HRD1Q08109 YHL012WYHL012W 1482 nt2.17□□□□□ -2.06
HRD1Q08109 DUG2YBR281C 2637 nt2.17□□□□□ -2.06
HRD1Q08109 MLH1YMR167W 2310 nt2.17□□□□□ -2.06
HRD1Q08109 HMS1YOR032C 1305 nt2.17□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms