Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC010542.4-201ENST00000563151 1910 ntBASIC19.71■□□□□ 0.75
RPS3AP61247 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS3AP61247 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.71■□□□□ 0.75
RPS3AP61247 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS3AP61247 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPS3AP61247 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPS3AP61247 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS3AP61247 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS3AP61247 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.71■□□□□ 0.75
RPS3AP61247 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS3AP61247 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RPS3AP61247 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPS3AP61247 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS3AP61247 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS3AP61247 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPS3AP61247 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RPS3AP61247 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.7■□□□□ 0.74
RPS3AP61247 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RPS3AP61247 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS3AP61247 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.7■□□□□ 0.74
RPS3AP61247 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RPS3AP61247 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.7■□□□□ 0.74
RPS3AP61247 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.7■□□□□ 0.74
RPS3AP61247 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS3AP61247 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS3AP61247 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS3AP61247 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.69■□□□□ 0.74
RPS3AP61247 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPS3AP61247 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.69■□□□□ 0.74
RPS3AP61247 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RPS3AP61247 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPS3AP61247 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPS3AP61247 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RPS3AP61247 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.69■□□□□ 0.74
RPS3AP61247 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.69■□□□□ 0.74
RPS3AP61247 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPS3AP61247 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPS3AP61247 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPS3AP61247 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPS3AP61247 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPS3AP61247 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS3AP61247 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS3AP61247 MIR935-201ENST00000401179 91 ntBASIC19.68■□□□□ 0.74
RPS3AP61247 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS3AP61247 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RPS3AP61247 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.68■□□□□ 0.74
RPS3AP61247 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.68■□□□□ 0.74
RPS3AP61247 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS3AP61247 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS3AP61247 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPS3AP61247 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPS3AP61247 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPS3AP61247 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS3AP61247 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.67■□□□□ 0.74
RPS3AP61247 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS3AP61247 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPS3AP61247 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.67■□□□□ 0.74
RPS3AP61247 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.67■□□□□ 0.74
RPS3AP61247 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.67■□□□□ 0.74
RPS3AP61247 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RPS3AP61247 LINC01521-201ENST00000504184 1943 ntBASIC19.66■□□□□ 0.74
RPS3AP61247 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS3AP61247 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.66■□□□□ 0.74
RPS3AP61247 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS3AP61247 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS3AP61247 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPS3AP61247 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RPS3AP61247 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.66■□□□□ 0.74
RPS3AP61247 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS3AP61247 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.66■□□□□ 0.74
RPS3AP61247 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.66■□□□□ 0.74
RPS3AP61247 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.66■□□□□ 0.74
RPS3AP61247 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPS3AP61247 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.66■□□□□ 0.74
RPS3AP61247 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS3AP61247 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS3AP61247 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RPS3AP61247 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS3AP61247 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.66■□□□□ 0.74
RPS3AP61247 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.66■□□□□ 0.74
RPS3AP61247 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS3AP61247 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS3AP61247 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPS3AP61247 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS3AP61247 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RPS3AP61247 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.65■□□□□ 0.74
RPS3AP61247 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS3AP61247 MIR572-201ENST00000384983 95 ntBASIC19.65■□□□□ 0.74
RPS3AP61247 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.65■□□□□ 0.74
RPS3AP61247 AL031602.1-201ENST00000633169 911 ntBASIC19.65■□□□□ 0.74
RPS3AP61247 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.65■□□□□ 0.74
RPS3AP61247 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RPS3AP61247 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RPS3AP61247 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS3AP61247 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPS3AP61247 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS3AP61247 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS3AP61247 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RPS3AP61247 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RPS3AP61247 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms