Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 BMP1-204ENST00000397814 836 ntTSL 4 BASIC27.24■■□□□ 1.95
EIF4A1P60842 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC27.24■■□□□ 1.95
EIF4A1P60842 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
EIF4A1P60842 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC27.24■■□□□ 1.95
EIF4A1P60842 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
EIF4A1P60842 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
EIF4A1P60842 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC27.24■■□□□ 1.95
EIF4A1P60842 KRT16P2-201ENST00000414673 1423 ntBASIC27.24■■□□□ 1.95
EIF4A1P60842 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
EIF4A1P60842 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
EIF4A1P60842 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
EIF4A1P60842 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
EIF4A1P60842 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
EIF4A1P60842 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
EIF4A1P60842 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
EIF4A1P60842 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC27.23■■□□□ 1.95
EIF4A1P60842 AC133552.2-202ENST00000575694 574 ntBASIC27.23■■□□□ 1.95
EIF4A1P60842 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
EIF4A1P60842 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC27.23■■□□□ 1.95
EIF4A1P60842 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC27.23■■□□□ 1.95
EIF4A1P60842 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
EIF4A1P60842 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.23■■□□□ 1.95
EIF4A1P60842 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC27.23■■□□□ 1.95
EIF4A1P60842 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC27.22■■□□□ 1.95
EIF4A1P60842 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
EIF4A1P60842 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
EIF4A1P60842 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
EIF4A1P60842 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC27.22■■□□□ 1.95
EIF4A1P60842 AC120498.10-201ENST00000621827 505 ntBASIC27.22■■□□□ 1.95
EIF4A1P60842 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC27.22■■□□□ 1.95
EIF4A1P60842 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
EIF4A1P60842 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC27.22■■□□□ 1.95
EIF4A1P60842 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC27.22■■□□□ 1.95
EIF4A1P60842 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC27.22■■□□□ 1.95
EIF4A1P60842 AC068473.5-201ENST00000616428 2072 ntBASIC27.21■■□□□ 1.95
EIF4A1P60842 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
EIF4A1P60842 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
EIF4A1P60842 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
EIF4A1P60842 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
EIF4A1P60842 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC27.21■■□□□ 1.95
EIF4A1P60842 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
EIF4A1P60842 FGF8-207ENST00000618991 856 ntTSL 3 BASIC27.21■■□□□ 1.95
EIF4A1P60842 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
EIF4A1P60842 RBM17P2-201ENST00000616397 1405 ntBASIC27.21■■□□□ 1.95
EIF4A1P60842 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
EIF4A1P60842 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
EIF4A1P60842 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC27.21■■□□□ 1.95
EIF4A1P60842 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
EIF4A1P60842 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
EIF4A1P60842 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
EIF4A1P60842 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
EIF4A1P60842 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
EIF4A1P60842 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC27.2■■□□□ 1.94
EIF4A1P60842 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
EIF4A1P60842 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC27.2■■□□□ 1.94
EIF4A1P60842 AC242852.2-201ENST00000615738 1807 ntBASIC27.2■■□□□ 1.94
EIF4A1P60842 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.94
EIF4A1P60842 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC27.2■■□□□ 1.94
EIF4A1P60842 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC27.19■■□□□ 1.94
EIF4A1P60842 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
EIF4A1P60842 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC27.19■■□□□ 1.94
EIF4A1P60842 CYP2T1P-201ENST00000432607 1285 ntBASIC27.19■■□□□ 1.94
EIF4A1P60842 AF201337.1-201ENST00000520239 748 ntBASIC27.19■■□□□ 1.94
EIF4A1P60842 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
EIF4A1P60842 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC27.19■■□□□ 1.94
EIF4A1P60842 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC27.19■■□□□ 1.94
EIF4A1P60842 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC27.18■■□□□ 1.94
EIF4A1P60842 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
EIF4A1P60842 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
EIF4A1P60842 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
EIF4A1P60842 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC27.18■■□□□ 1.94
EIF4A1P60842 AL138781.1-201ENST00000566567 1274 ntBASIC27.18■■□□□ 1.94
EIF4A1P60842 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC27.18■■□□□ 1.94
EIF4A1P60842 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC27.18■■□□□ 1.94
EIF4A1P60842 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
EIF4A1P60842 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC27.18■■□□□ 1.94
EIF4A1P60842 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
EIF4A1P60842 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC27.18■■□□□ 1.94
EIF4A1P60842 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
EIF4A1P60842 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
EIF4A1P60842 AC233723.2-201ENST00000623798 2106 ntBASIC27.17■■□□□ 1.94
EIF4A1P60842 GUSBP5-202ENST00000510805 1989 ntBASIC27.17■■□□□ 1.94
EIF4A1P60842 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
EIF4A1P60842 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC27.17■■□□□ 1.94
EIF4A1P60842 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
EIF4A1P60842 AC105036.2-201ENST00000569468 176 ntBASIC27.17■■□□□ 1.94
EIF4A1P60842 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
EIF4A1P60842 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC27.17■■□□□ 1.94
EIF4A1P60842 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
EIF4A1P60842 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
EIF4A1P60842 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
EIF4A1P60842 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC27.16■■□□□ 1.94
EIF4A1P60842 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
EIF4A1P60842 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
EIF4A1P60842 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
EIF4A1P60842 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
EIF4A1P60842 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
EIF4A1P60842 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
EIF4A1P60842 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
EIF4A1P60842 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms