Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 RPL13BYMR142C 600 nt3.53□□□□□ -1.84
UPF3P48412 SRL1YOR247W 633 nt3.53□□□□□ -1.84
UPF3P48412 ARL1YBR164C 552 nt3.53□□□□□ -1.84
UPF3P48412 DER1YBR201W 636 nt3.53□□□□□ -1.84
UPF3P48412 GYL1YMR192W 2163 nt3.53□□□□□ -1.84
UPF3P48412 RDS1YCR106W 2499 nt3.53□□□□□ -1.84
UPF3P48412 21S_rRNA21S_rRNA 3296 nt3.53□□□□□ -1.84
UPF3P48412 RSF2YJR127C 4143 nt3.53□□□□□ -1.84
UPF3P48412 YJR030CYJR030C 2238 nt3.52□□□□□ -1.85
UPF3P48412 RAD26YJR035W 3258 nt3.52□□□□□ -1.85
UPF3P48412 TPO5YKL174C 1857 nt3.52□□□□□ -1.85
UPF3P48412 PEX1YKL197C 3132 nt3.52□□□□□ -1.85
UPF3P48412 MRPL11YDL202W 750 nt3.52□□□□□ -1.85
UPF3P48412 INO4YOL108C 456 nt3.52□□□□□ -1.85
UPF3P48412 THI80YOR143C 960 nt3.52□□□□□ -1.85
UPF3P48412 HUA2YOR284W 732 nt3.52□□□□□ -1.85
UPF3P48412 DAN4YJR151C 3486 nt3.52□□□□□ -1.85
UPF3P48412 EPL1YFL024C 2499 nt3.52□□□□□ -1.85
UPF3P48412 YCG1YDR325W 3108 nt3.52□□□□□ -1.85
UPF3P48412 YJL049WYJL049W 1353 nt3.51□□□□□ -1.85
UPF3P48412 PHO81YGR233C 3537 nt3.51□□□□□ -1.85
UPF3P48412 MDN1YLR106C 14733 nt3.51□□□□□ -1.85
UPF3P48412 YGR073CYGR073C 372 nt3.51□□□□□ -1.85
UPF3P48412 GTR2YGR163W 1026 nt3.51□□□□□ -1.85
UPF3P48412 YHL002C-AYHL002C-A 489 nt3.51□□□□□ -1.85
UPF3P48412 MDV1YJL112W 2145 nt3.51□□□□□ -1.85
UPF3P48412 YJL114WYJL114W 681 nt3.51□□□□□ -1.85
UPF3P48412 YNL320WYNL320W 855 nt3.51□□□□□ -1.85
UPF3P48412 SPR2YOR214C 711 nt3.51□□□□□ -1.85
UPF3P48412 TIF4631YGR162W 2859 nt3.51□□□□□ -1.85
UPF3P48412 CHS3YBR023C 3498 nt3.51□□□□□ -1.85
UPF3P48412 ESA1YOR244W 1338 nt3.5□□□□□ -1.85
UPF3P48412 ATG21YPL100W 1491 nt3.5□□□□□ -1.85
UPF3P48412 YDR464C-AYDR464C-A 189 nt3.5□□□□□ -1.85
UPF3P48412 IES6YEL044W 501 nt3.5□□□□□ -1.85
UPF3P48412 CWC23YGL128C 852 nt3.5□□□□□ -1.85
UPF3P48412 PET54YGR222W 882 nt3.5□□□□□ -1.85
UPF3P48412 YJL032WYJL032W 315 nt3.5□□□□□ -1.85
UPF3P48412 YKR011CYKR011C 1062 nt3.5□□□□□ -1.85
UPF3P48412 RPL6BYLR448W 531 nt3.5□□□□□ -1.85
UPF3P48412 FAR3YMR052W 615 nt3.5□□□□□ -1.85
UPF3P48412 YNL276CYNL276C 396 nt3.5□□□□□ -1.85
UPF3P48412 LTP1YPR073C 486 nt3.5□□□□□ -1.85
UPF3P48412 SSL1YLR005W 1386 nt3.5□□□□□ -1.85
UPF3P48412 MUS81YDR386W 1899 nt3.5□□□□□ -1.85
UPF3P48412 SQS1YNL224C 2304 nt3.49□□□□□ -1.85
UPF3P48412 SEA4YBL104C 3117 nt3.49□□□□□ -1.85
UPF3P48412 NOP4YPL043W 2058 nt3.49□□□□□ -1.85
UPF3P48412 NRG1YDR043C 696 nt3.49□□□□□ -1.85
UPF3P48412 THO1YER063W 657 nt3.49□□□□□ -1.85
UPF3P48412 ANB1YJR047C 474 nt3.49□□□□□ -1.85
UPF3P48412 VMA5YKL080W 1179 nt3.49□□□□□ -1.85
UPF3P48412 RPL15AYLR029C 615 nt3.49□□□□□ -1.85
UPF3P48412 HHF2YNL030W 312 nt3.49□□□□□ -1.85
UPF3P48412 YBR090CYBR090C 369 nt3.49□□□□□ -1.85
UPF3P48412 AEP1YMR064W 1557 nt3.49□□□□□ -1.85
UPF3P48412 POL4YCR014C 1749 nt3.49□□□□□ -1.85
UPF3P48412 PEX6YNL329C 3093 nt3.49□□□□□ -1.85
UPF3P48412 AVT5YBL089W 1380 nt3.49□□□□□ -1.85
UPF3P48412 MSD1YPL104W 1977 nt3.49□□□□□ -1.85
UPF3P48412 GWT1YJL091C 1473 nt3.48□□□□□ -1.85
UPF3P48412 TRM82YDR165W 1335 nt3.48□□□□□ -1.85
UPF3P48412 YDR170W-AYDR170W-A 1323 nt3.48□□□□□ -1.85
UPF3P48412 YBL005W-AYBL005W-A 1323 nt3.48□□□□□ -1.85
UPF3P48412 YMR046CYMR046C 1323 nt3.48□□□□□ -1.85
UPF3P48412 YNL011CYNL011C 1335 nt3.48□□□□□ -1.85
UPF3P48412 YNL284C-AYNL284C-A 1323 nt3.48□□□□□ -1.85
UPF3P48412 MNT3YIL014W 1893 nt3.48□□□□□ -1.85
UPF3P48412 YDR133CYDR133C 336 nt3.48□□□□□ -1.85
UPF3P48412 YGR126WYGR126W 693 nt3.48□□□□□ -1.85
UPF3P48412 RPS0AYGR214W 759 nt3.48□□□□□ -1.85
UPF3P48412 SPO11YHL022C 1197 nt3.48□□□□□ -1.85
UPF3P48412 IKI1YHR187W 930 nt3.48□□□□□ -1.85
UPF3P48412 SDP1YIL113W 630 nt3.48□□□□□ -1.85
UPF3P48412 PIR1YKL164C 1026 nt3.48□□□□□ -1.85
UPF3P48412 COX19YLL018C-A 297 nt3.48□□□□□ -1.85
UPF3P48412 ATG10YLL042C 504 nt3.48□□□□□ -1.85
UPF3P48412 RIM11YMR139W 1113 nt3.48□□□□□ -1.85
UPF3P48412 MER1YNL210W 813 nt3.48□□□□□ -1.85
UPF3P48412 VAM10YOR068C 345 nt3.48□□□□□ -1.85
UPF3P48412 MGE1YOR232W 687 nt3.48□□□□□ -1.85
UPF3P48412 FDH1YOR388C 1131 nt3.48□□□□□ -1.85
UPF3P48412 YBR137WYBR137W 540 nt3.48□□□□□ -1.85
UPF3P48412 FRE8YLR047C 2061 nt3.48□□□□□ -1.85
UPF3P48412 VPS3YDR495C 3036 nt3.47□□□□□ -1.85
UPF3P48412 UBP8YMR223W 1416 nt3.47□□□□□ -1.85
UPF3P48412 SPT10YJL127C 1923 nt3.47□□□□□ -1.85
UPF3P48412 MIG3YER028C 1185 nt3.47□□□□□ -1.85
UPF3P48412 YPT6YLR262C 648 nt3.47□□□□□ -1.85
UPF3P48412 YSF3YNL138W-A 258 nt3.47□□□□□ -1.85
UPF3P48412 RPS7AYOR096W 573 nt3.47□□□□□ -1.85
UPF3P48412 TUM1YOR251C 915 nt3.47□□□□□ -1.85
UPF3P48412 RRN6YBL014C 2685 nt3.47□□□□□ -1.85
UPF3P48412 CWH41YGL027C 2502 nt3.47□□□□□ -1.85
UPF3P48412 MSH4YFL003C 2637 nt3.46□□□□□ -1.86
UPF3P48412 VAC14YLR386W 2643 nt3.46□□□□□ -1.86
UPF3P48412 YDR034C-DYDR034C-D 5313 nt3.46□□□□□ -1.86
UPF3P48412 YCR085WYCR085W 354 nt3.46□□□□□ -1.86
UPF3P48412 RTT105YER104W 627 nt3.46□□□□□ -1.86
UPF3P48412 VMA10YHR039C-A 345 nt3.46□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms