Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM23P36406 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM23P36406 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
TRIM23P36406 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TRIM23P36406 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM23P36406 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM23P36406 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM23P36406 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM23P36406 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM23P36406 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM23P36406 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.9■□□□□ 0.94
TRIM23P36406 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM23P36406 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM23P36406 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM23P36406 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRIM23P36406 AC010536.3-201ENST00000620306 533 ntBASIC20.9■□□□□ 0.94
TRIM23P36406 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM23P36406 AC010542.4-201ENST00000563151 1910 ntBASIC20.9■□□□□ 0.94
TRIM23P36406 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM23P36406 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM23P36406 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM23P36406 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
TRIM23P36406 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
TRIM23P36406 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM23P36406 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM23P36406 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM23P36406 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM23P36406 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM23P36406 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM23P36406 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TRIM23P36406 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM23P36406 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM23P36406 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TRIM23P36406 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM23P36406 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM23P36406 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM23P36406 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRIM23P36406 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM23P36406 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TRIM23P36406 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM23P36406 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.88■□□□□ 0.93
TRIM23P36406 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.88■□□□□ 0.93
TRIM23P36406 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.88■□□□□ 0.93
TRIM23P36406 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM23P36406 AC120498.10-201ENST00000621827 505 ntBASIC20.88■□□□□ 0.93
TRIM23P36406 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM23P36406 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM23P36406 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM23P36406 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM23P36406 KRT16P2-201ENST00000414673 1423 ntBASIC20.87■□□□□ 0.93
TRIM23P36406 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM23P36406 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM23P36406 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM23P36406 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM23P36406 AC007322.1-201ENST00000426983 750 ntBASIC20.87■□□□□ 0.93
TRIM23P36406 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.87■□□□□ 0.93
TRIM23P36406 CNN2P6-201ENST00000439038 900 ntBASIC20.87■□□□□ 0.93
TRIM23P36406 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.87■□□□□ 0.93
TRIM23P36406 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM23P36406 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM23P36406 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM23P36406 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM23P36406 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM23P36406 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM23P36406 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM23P36406 ECEL1P1-201ENST00000373592 1742 ntBASIC20.87■□□□□ 0.93
TRIM23P36406 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM23P36406 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM23P36406 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TRIM23P36406 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM23P36406 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
TRIM23P36406 TERF1P5-201ENST00000477545 1207 ntBASIC20.86■□□□□ 0.93
TRIM23P36406 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM23P36406 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM23P36406 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM23P36406 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM23P36406 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
TRIM23P36406 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM23P36406 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM23P36406 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM23P36406 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM23P36406 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM23P36406 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM23P36406 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TRIM23P36406 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM23P36406 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM23P36406 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM23P36406 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM23P36406 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.85■□□□□ 0.93
TRIM23P36406 NCF1B-203ENST00000435988 1254 ntBASIC20.85■□□□□ 0.93
TRIM23P36406 AC006970.2-201ENST00000450065 779 ntBASIC20.85■□□□□ 0.93
TRIM23P36406 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM23P36406 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM23P36406 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.85■□□□□ 0.93
TRIM23P36406 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
TRIM23P36406 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.85■□□□□ 0.93
TRIM23P36406 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM23P36406 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM23P36406 AC061975.6-201ENST00000579045 1553 ntBASIC20.85■□□□□ 0.93
TRIM23P36406 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms