Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHC1P29353 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SHC1P29353 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.34■□□□□ 0.69
SHC1P29353 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHC1P29353 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHC1P29353 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.34■□□□□ 0.69
SHC1P29353 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHC1P29353 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SHC1P29353 AC026471.6-201ENST00000622954 1905 ntBASIC19.33■□□□□ 0.69
SHC1P29353 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHC1P29353 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SHC1P29353 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SHC1P29353 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SHC1P29353 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SHC1P29353 AC087623.3-201ENST00000607047 1098 ntBASIC19.33■□□□□ 0.68
SHC1P29353 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SHC1P29353 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.33■□□□□ 0.68
SHC1P29353 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SHC1P29353 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHC1P29353 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC1P29353 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC1P29353 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC1P29353 AC005229.4-201ENST00000610085 2198 ntBASIC19.32■□□□□ 0.68
SHC1P29353 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC1P29353 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC1P29353 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHC1P29353 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SHC1P29353 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.32■□□□□ 0.68
SHC1P29353 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.32■□□□□ 0.68
SHC1P29353 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHC1P29353 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHC1P29353 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SHC1P29353 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.32■□□□□ 0.68
SHC1P29353 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SHC1P29353 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SHC1P29353 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.31■□□□□ 0.68
SHC1P29353 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.31■□□□□ 0.68
SHC1P29353 AC005224.4-201ENST00000583262 1652 ntBASIC19.31■□□□□ 0.68
SHC1P29353 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHC1P29353 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SHC1P29353 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SHC1P29353 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHC1P29353 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC1P29353 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC1P29353 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHC1P29353 AC097381.1-201ENST00000429019 1296 ntBASIC19.31■□□□□ 0.68
SHC1P29353 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC1P29353 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.31■□□□□ 0.68
SHC1P29353 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.31■□□□□ 0.68
SHC1P29353 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC1P29353 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.3■□□□□ 0.68
SHC1P29353 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHC1P29353 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHC1P29353 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC1P29353 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC1P29353 AC123595.1-201ENST00000440769 1046 ntBASIC19.3■□□□□ 0.68
SHC1P29353 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.3■□□□□ 0.68
SHC1P29353 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SHC1P29353 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.3■□□□□ 0.68
SHC1P29353 CCDC92B-201ENST00000575506 885 ntBASIC19.3■□□□□ 0.68
SHC1P29353 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SHC1P29353 MIR6821-201ENST00000617625 74 ntBASIC19.3■□□□□ 0.68
SHC1P29353 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC1P29353 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHC1P29353 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.3■□□□□ 0.68
SHC1P29353 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHC1P29353 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC1P29353 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.29■□□□□ 0.68
SHC1P29353 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC1P29353 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC1P29353 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.29■□□□□ 0.68
SHC1P29353 AC009237.3-201ENST00000393279 1427 ntBASIC19.29■□□□□ 0.68
SHC1P29353 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC1P29353 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC1P29353 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.29■□□□□ 0.68
SHC1P29353 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC1P29353 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SHC1P29353 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.29■□□□□ 0.68
SHC1P29353 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.29■□□□□ 0.68
SHC1P29353 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.29■□□□□ 0.68
SHC1P29353 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.29■□□□□ 0.68
SHC1P29353 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SHC1P29353 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC1P29353 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC1P29353 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC1P29353 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHC1P29353 LINC02228-203ENST00000641970 1355 ntBASIC19.29■□□□□ 0.68
SHC1P29353 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC1P29353 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.29■□□□□ 0.68
SHC1P29353 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.29■□□□□ 0.68
SHC1P29353 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHC1P29353 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC1P29353 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHC1P29353 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHC1P29353 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.28■□□□□ 0.68
SHC1P29353 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.28■□□□□ 0.68
SHC1P29353 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.28■□□□□ 0.68
SHC1P29353 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.28■□□□□ 0.68
SHC1P29353 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SHC1P29353 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms