Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 YOR034C-AYOR034C-A 243 nt3.7□□□□□ -1.82
CDC43P18898 YPL107WYPL107W 747 nt3.7□□□□□ -1.82
CDC43P18898 OPY2YPR075C 1083 nt3.7□□□□□ -1.82
CDC43P18898 PRS5YOL061W 1491 nt3.7□□□□□ -1.82
CDC43P18898 LST4YKL176C 2487 nt3.7□□□□□ -1.82
CDC43P18898 PUF3YLL013C 2640 nt3.7□□□□□ -1.82
CDC43P18898 FUS2YMR232W 2034 nt3.7□□□□□ -1.82
CDC43P18898 DAL5YJR152W 1632 nt3.7□□□□□ -1.82
CDC43P18898 MSL5YLR116W 1431 nt3.7□□□□□ -1.82
CDC43P18898 LAS21YJL062W 2493 nt3.69□□□□□ -1.82
CDC43P18898 YEL077W-AYEL077W-A 483 nt3.69□□□□□ -1.82
CDC43P18898 YER190C-BYER190C-B 483 nt3.69□□□□□ -1.82
CDC43P18898 YFL068WYFL068W 483 nt3.69□□□□□ -1.82
CDC43P18898 YGR296C-BYGR296C-B 483 nt3.69□□□□□ -1.82
CDC43P18898 YHL050W-AYHL050W-A 483 nt3.69□□□□□ -1.82
CDC43P18898 YHR219C-AYHR219C-A 483 nt3.69□□□□□ -1.82
CDC43P18898 YIR020C-BYIR020C-B 735 nt3.69□□□□□ -1.82
CDC43P18898 YLL066W-AYLL066W-A 483 nt3.69□□□□□ -1.82
CDC43P18898 YLL067W-AYLL067W-A 483 nt3.69□□□□□ -1.82
CDC43P18898 YLR224WYLR224W 1110 nt3.69□□□□□ -1.82
CDC43P18898 RDN58-1RDN58-1 158 nt3.69□□□□□ -1.82
CDC43P18898 RDN58-2RDN58-2 158 nt3.69□□□□□ -1.82
CDC43P18898 YLR466C-AYLR466C-A 483 nt3.69□□□□□ -1.82
CDC43P18898 YLR467C-AYLR467C-A 483 nt3.69□□□□□ -1.82
CDC43P18898 YML133W-BYML133W-B 483 nt3.69□□□□□ -1.82
CDC43P18898 YNL339W-BYNL339W-B 483 nt3.69□□□□□ -1.82
CDC43P18898 YBL113W-AYBL113W-A 483 nt3.69□□□□□ -1.82
CDC43P18898 YOR331CYOR331C 558 nt3.69□□□□□ -1.82
CDC43P18898 YOR396C-AYOR396C-A 483 nt3.69□□□□□ -1.82
CDC43P18898 YPL197CYPL197C 414 nt3.69□□□□□ -1.82
CDC43P18898 YPL283W-BYPL283W-B 483 nt3.69□□□□□ -1.82
CDC43P18898 YPR204C-AYPR204C-A 483 nt3.69□□□□□ -1.82
CDC43P18898 snR54snR54 86 nt3.69□□□□□ -1.82
CDC43P18898 PMT4YJR143C 2289 nt3.69□□□□□ -1.82
CDC43P18898 CDC48YDL126C 2508 nt3.69□□□□□ -1.82
CDC43P18898 PPN1YDR452W 2025 nt3.68□□□□□ -1.82
CDC43P18898 NCS2YNL119W 1482 nt3.68□□□□□ -1.82
CDC43P18898 YLR152CYLR152C 1731 nt3.68□□□□□ -1.82
CDC43P18898 HIS4YCL030C 2400 nt3.68□□□□□ -1.82
CDC43P18898 MFA1YDR461W 111 nt3.68□□□□□ -1.82
CDC43P18898 YKL066WYKL066W 444 nt3.68□□□□□ -1.82
CDC43P18898 YKL083WYKL083W 615 nt3.68□□□□□ -1.82
CDC43P18898 PIR1YKL164C 1026 nt3.68□□□□□ -1.82
CDC43P18898 YRA2YKL214C 612 nt3.68□□□□□ -1.82
CDC43P18898 KTR2YKR061W 1278 nt3.68□□□□□ -1.82
CDC43P18898 YML057C-AYML057C-A 390 nt3.68□□□□□ -1.82
CDC43P18898 YML108WYML108W 318 nt3.68□□□□□ -1.82
CDC43P18898 YPL038W-AYPL038W-A 192 nt3.68□□□□□ -1.82
CDC43P18898 ROX1YPR065W 1107 nt3.68□□□□□ -1.82
CDC43P18898 YCL012CYCL012C 405 nt3.68□□□□□ -1.82
CDC43P18898 IZH3YLR023C 1632 nt3.68□□□□□ -1.82
CDC43P18898 SSL1YLR005W 1386 nt3.67□□□□□ -1.82
CDC43P18898 snR59snR59 78 nt3.67□□□□□ -1.82
CDC43P18898 tN(GUU)CtN(GUU)C 74 nt3.67□□□□□ -1.82
CDC43P18898 tN(GUU)FtN(GUU)F 74 nt3.67□□□□□ -1.82
CDC43P18898 tN(GUU)GtN(GUU)G 74 nt3.67□□□□□ -1.82
CDC43P18898 tN(GUU)KtN(GUU)K 74 nt3.67□□□□□ -1.82
CDC43P18898 tN(GUU)LtN(GUU)L 74 nt3.67□□□□□ -1.82
CDC43P18898 ERV1YGR029W 570 nt3.67□□□□□ -1.82
CDC43P18898 tN(GUU)N1tN(GUU)N1 74 nt3.67□□□□□ -1.82
CDC43P18898 tN(GUU)N2tN(GUU)N2 74 nt3.67□□□□□ -1.82
CDC43P18898 tN(GUU)O1tN(GUU)O1 74 nt3.67□□□□□ -1.82
CDC43P18898 tN(GUU)O2tN(GUU)O2 74 nt3.67□□□□□ -1.82
CDC43P18898 tN(GUU)PtN(GUU)P 74 nt3.67□□□□□ -1.82
CDC43P18898 YIL014C-AYIL014C-A 315 nt3.67□□□□□ -1.82
CDC43P18898 YKL069WYKL069W 543 nt3.67□□□□□ -1.82
CDC43P18898 RRT16YNL105W 429 nt3.67□□□□□ -1.82
CDC43P18898 GRE2YOL151W 1029 nt3.67□□□□□ -1.82
CDC43P18898 SFM1YOR021C 642 nt3.67□□□□□ -1.82
CDC43P18898 YOR225WYOR225W 330 nt3.67□□□□□ -1.82
CDC43P18898 YPL035CYPL035C 348 nt3.67□□□□□ -1.82
CDC43P18898 ATM1YMR301C 2073 nt3.67□□□□□ -1.82
CDC43P18898 RIM4YHL024W 2142 nt3.67□□□□□ -1.82
CDC43P18898 PDR15YDR406W 4590 nt3.66□□□□□ -1.82
CDC43P18898 GYP6YJL044C 1377 nt3.66□□□□□ -1.82
CDC43P18898 TRF5YNL299W 1929 nt3.66□□□□□ -1.82
CDC43P18898 TRS85YDR108W 2097 nt3.66□□□□□ -1.82
CDC43P18898 TOG1YER184C 2385 nt3.66□□□□□ -1.82
CDC43P18898 SKG3YLR187W 3081 nt3.66□□□□□ -1.82
CDC43P18898 YJR098CYJR098C 1971 nt3.66□□□□□ -1.82
CDC43P18898 BSC2YDR275W 708 nt3.66□□□□□ -1.82
CDC43P18898 YGR121W-AYGR121W-A 216 nt3.66□□□□□ -1.82
CDC43P18898 RTS3YGR161C 792 nt3.66□□□□□ -1.82
CDC43P18898 VMA10YHR039C-A 345 nt3.66□□□□□ -1.82
CDC43P18898 YJL169WYJL169W 369 nt3.66□□□□□ -1.82
CDC43P18898 ECM4YKR076W 1113 nt3.66□□□□□ -1.82
CDC43P18898 COQ10YOL008W 624 nt3.66□□□□□ -1.82
CDC43P18898 DIB1YPR082C 432 nt3.66□□□□□ -1.82
CDC43P18898 AIM4YBR194W 372 nt3.66□□□□□ -1.82
CDC43P18898 ARC40YBR234C 1155 nt3.66□□□□□ -1.82
CDC43P18898 SHG1YBR258C 429 nt3.66□□□□□ -1.82
CDC43P18898 SWC4YGR002C 1431 nt3.66□□□□□ -1.82
CDC43P18898 HFD1YMR110C 1599 nt3.66□□□□□ -1.82
CDC43P18898 MEF2YJL102W 2460 nt3.66□□□□□ -1.82
CDC43P18898 YBR012W-AYBR012W-A 1323 nt3.66□□□□□ -1.82
CDC43P18898 YOR142W-AYOR142W-A 1323 nt3.66□□□□□ -1.82
CDC43P18898 YPR158W-AYPR158W-A 1323 nt3.66□□□□□ -1.82
CDC43P18898 UBP10YNL186W 2379 nt3.66□□□□□ -1.82
CDC43P18898 AVT1YJR001W 1809 nt3.65□□□□□ -1.82
CDC43P18898 STE24YJR117W 1362 nt3.65□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 38.1 ms