Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NELFEP18615 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NELFEP18615 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NELFEP18615 AC026310.3-201ENST00000625186 2373 ntBASIC20.8■□□□□ 0.92
NELFEP18615 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NELFEP18615 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NELFEP18615 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NELFEP18615 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NELFEP18615 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.8■□□□□ 0.92
NELFEP18615 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NELFEP18615 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.8■□□□□ 0.92
NELFEP18615 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NELFEP18615 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NELFEP18615 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NELFEP18615 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NELFEP18615 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NELFEP18615 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NELFEP18615 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NELFEP18615 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.79■□□□□ 0.92
NELFEP18615 AC139530.1-201ENST00000575312 1977 ntBASIC20.79■□□□□ 0.92
NELFEP18615 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.79■□□□□ 0.92
NELFEP18615 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NELFEP18615 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
NELFEP18615 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.79■□□□□ 0.92
NELFEP18615 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.79■□□□□ 0.92
NELFEP18615 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.79■□□□□ 0.92
NELFEP18615 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NELFEP18615 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
NELFEP18615 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NELFEP18615 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.78■□□□□ 0.92
NELFEP18615 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.78■□□□□ 0.92
NELFEP18615 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
NELFEP18615 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NELFEP18615 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NELFEP18615 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NELFEP18615 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.78■□□□□ 0.92
NELFEP18615 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
NELFEP18615 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NELFEP18615 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
NELFEP18615 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NELFEP18615 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.78■□□□□ 0.92
NELFEP18615 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.78■□□□□ 0.92
NELFEP18615 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NELFEP18615 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NELFEP18615 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NELFEP18615 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.77■□□□□ 0.92
NELFEP18615 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NELFEP18615 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NELFEP18615 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NELFEP18615 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.77■□□□□ 0.92
NELFEP18615 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NELFEP18615 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.77■□□□□ 0.92
NELFEP18615 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NELFEP18615 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.77■□□□□ 0.92
NELFEP18615 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.77■□□□□ 0.92
NELFEP18615 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.77■□□□□ 0.92
NELFEP18615 RARRES2P11-201ENST00000635158 484 ntBASIC20.77■□□□□ 0.92
NELFEP18615 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NELFEP18615 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NELFEP18615 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
NELFEP18615 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NELFEP18615 LINC01960-201ENST00000563759 1884 ntBASIC20.77■□□□□ 0.92
NELFEP18615 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NELFEP18615 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NELFEP18615 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NELFEP18615 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.76■□□□□ 0.91
NELFEP18615 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.76■□□□□ 0.91
NELFEP18615 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NELFEP18615 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.76■□□□□ 0.91
NELFEP18615 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NELFEP18615 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.76■□□□□ 0.91
NELFEP18615 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.76■□□□□ 0.91
NELFEP18615 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.76■□□□□ 0.91
NELFEP18615 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.76■□□□□ 0.91
NELFEP18615 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.76■□□□□ 0.91
NELFEP18615 KRT18P61-201ENST00000585825 1298 ntBASIC20.76■□□□□ 0.91
NELFEP18615 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.76■□□□□ 0.91
NELFEP18615 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NELFEP18615 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NELFEP18615 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NELFEP18615 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.76■□□□□ 0.91
NELFEP18615 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.76■□□□□ 0.91
NELFEP18615 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NELFEP18615 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NELFEP18615 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NELFEP18615 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NELFEP18615 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NELFEP18615 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.75■□□□□ 0.91
NELFEP18615 ESRRAP2-201ENST00000418437 1549 ntBASIC20.75■□□□□ 0.91
NELFEP18615 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NELFEP18615 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NELFEP18615 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.75■□□□□ 0.91
NELFEP18615 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NELFEP18615 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NELFEP18615 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NELFEP18615 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
NELFEP18615 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NELFEP18615 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NELFEP18615 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NELFEP18615 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms