Protein–RNA interactions for Protein: P18077

RPL35A, 60S ribosomal protein L35a, humanhuman

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35AP18077 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPL35AP18077 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPL35AP18077 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.7■□□□□ 0.1
RPL35AP18077 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPL35AP18077 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPL35AP18077 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC15.69■□□□□ 0.1
RPL35AP18077 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPL35AP18077 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RPL35AP18077 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RPL35AP18077 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPL35AP18077 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPL35AP18077 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPL35AP18077 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RPL35AP18077 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RPL35AP18077 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RPL35AP18077 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.69■□□□□ 0.1
RPL35AP18077 AC004911.1-201ENST00000416316 871 ntBASIC15.69■□□□□ 0.1
RPL35AP18077 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.69■□□□□ 0.1
RPL35AP18077 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
RPL35AP18077 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.69■□□□□ 0.1
RPL35AP18077 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.69■□□□□ 0.1
RPL35AP18077 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
RPL35AP18077 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPL35AP18077 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.69■□□□□ 0.1
RPL35AP18077 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPL35AP18077 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.69■□□□□ 0.1
RPL35AP18077 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPL35AP18077 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPL35AP18077 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPL35AP18077 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPL35AP18077 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPL35AP18077 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPL35AP18077 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RPL35AP18077 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.68■□□□□ 0.1
RPL35AP18077 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
RPL35AP18077 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.68■□□□□ 0.1
RPL35AP18077 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPL35AP18077 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPL35AP18077 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPL35AP18077 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.68■□□□□ 0.1
RPL35AP18077 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.68■□□□□ 0.1
RPL35AP18077 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.68■□□□□ 0.1
RPL35AP18077 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPL35AP18077 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPL35AP18077 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPL35AP18077 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPL35AP18077 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPL35AP18077 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPL35AP18077 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.68■□□□□ 0.1
RPL35AP18077 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
RPL35AP18077 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RPL35AP18077 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPL35AP18077 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPL35AP18077 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RPL35AP18077 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPL35AP18077 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPL35AP18077 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RPL35AP18077 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPL35AP18077 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.67■□□□□ 0.1
RPL35AP18077 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPL35AP18077 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.67■□□□□ 0.1
RPL35AP18077 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.67■□□□□ 0.1
RPL35AP18077 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RPL35AP18077 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPL35AP18077 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.67■□□□□ 0.1
RPL35AP18077 FAM99A-202ENST00000538190 1989 ntBASIC15.67■□□□□ 0.1
RPL35AP18077 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPL35AP18077 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPL35AP18077 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.67■□□□□ 0.1
RPL35AP18077 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.67■□□□□ 0.1
RPL35AP18077 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.67■□□□□ 0.1
RPL35AP18077 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPL35AP18077 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RPL35AP18077 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPL35AP18077 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPL35AP18077 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPL35AP18077 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RPL35AP18077 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPL35AP18077 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPL35AP18077 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPL35AP18077 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RPL35AP18077 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.66■□□□□ 0.1
RPL35AP18077 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.66■□□□□ 0.1
RPL35AP18077 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.66■□□□□ 0.1
RPL35AP18077 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.66■□□□□ 0.1
RPL35AP18077 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.66■□□□□ 0.1
RPL35AP18077 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPL35AP18077 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPL35AP18077 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPL35AP18077 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPL35AP18077 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
RPL35AP18077 AC026471.6-201ENST00000622954 1905 ntBASIC15.66■□□□□ 0.1
RPL35AP18077 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.66■□□□□ 0.1
RPL35AP18077 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPL35AP18077 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPL35AP18077 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPL35AP18077 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.65■□□□□ 0.1
RPL35AP18077 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPL35AP18077 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPL35AP18077 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms