Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
SNRPA1P09661 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
SNRPA1P09661 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC27.13■■□□□ 1.93
SNRPA1P09661 AC093787.1-201ENST00000450396 207 ntBASIC27.13■■□□□ 1.93
SNRPA1P09661 AC069236.1-201ENST00000604339 616 ntBASIC27.13■■□□□ 1.93
SNRPA1P09661 AC016405.3-201ENST00000607710 860 ntBASIC27.13■■□□□ 1.93
SNRPA1P09661 AC243732.1-201ENST00000612648 864 ntBASIC27.13■■□□□ 1.93
SNRPA1P09661 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
SNRPA1P09661 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
SNRPA1P09661 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SNRPA1P09661 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
SNRPA1P09661 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC27.12■■□□□ 1.93
SNRPA1P09661 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
SNRPA1P09661 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
SNRPA1P09661 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNRPA1P09661 MIR4758-201ENST00000577688 71 ntBASIC27.12■■□□□ 1.93
SNRPA1P09661 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC27.12■■□□□ 1.93
SNRPA1P09661 AC008694.1-202ENST00000636953 945 ntBASIC27.12■■□□□ 1.93
SNRPA1P09661 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SNRPA1P09661 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNRPA1P09661 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC27.12■■□□□ 1.93
SNRPA1P09661 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SNRPA1P09661 TSPY20P-201ENST00000450910 630 ntBASIC27.11■■□□□ 1.93
SNRPA1P09661 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC27.11■■□□□ 1.93
SNRPA1P09661 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC27.11■■□□□ 1.93
SNRPA1P09661 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC27.11■■□□□ 1.93
SNRPA1P09661 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SNRPA1P09661 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SNRPA1P09661 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SNRPA1P09661 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC27.11■■□□□ 1.93
SNRPA1P09661 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SNRPA1P09661 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SNRPA1P09661 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNRPA1P09661 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNRPA1P09661 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SNRPA1P09661 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNRPA1P09661 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNRPA1P09661 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNRPA1P09661 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNRPA1P09661 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC27.1■■□□□ 1.93
SNRPA1P09661 PHB2-213ENST00000546111 858 ntTSL 2 BASIC27.1■■□□□ 1.93
SNRPA1P09661 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC27.1■■□□□ 1.93
SNRPA1P09661 AL162412.1-201ENST00000567129 965 ntBASIC27.1■■□□□ 1.93
SNRPA1P09661 AL591742.1-201ENST00000604433 565 ntBASIC27.1■■□□□ 1.93
SNRPA1P09661 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNRPA1P09661 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNRPA1P09661 AC026471.6-201ENST00000622954 1905 ntBASIC27.1■■□□□ 1.93
SNRPA1P09661 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SNRPA1P09661 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SNRPA1P09661 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SNRPA1P09661 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNRPA1P09661 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC27.09■■□□□ 1.93
SNRPA1P09661 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC27.09■■□□□ 1.93
SNRPA1P09661 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC27.09■■□□□ 1.93
SNRPA1P09661 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC27.09■■□□□ 1.93
SNRPA1P09661 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC27.09■■□□□ 1.93
SNRPA1P09661 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC27.09■■□□□ 1.93
SNRPA1P09661 TMEM191A-211ENST00000637163 1067 ntBASIC27.09■■□□□ 1.93
SNRPA1P09661 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC27.09■■□□□ 1.93
SNRPA1P09661 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SNRPA1P09661 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNRPA1P09661 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SNRPA1P09661 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC27.08■■□□□ 1.93
SNRPA1P09661 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC27.08■■□□□ 1.93
SNRPA1P09661 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC27.08■■□□□ 1.93
SNRPA1P09661 ME2-208ENST00000638937 2471 ntTSL 5 BASIC27.08■■□□□ 1.93
SNRPA1P09661 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC27.07■■□□□ 1.92
SNRPA1P09661 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SNRPA1P09661 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
SNRPA1P09661 PPP1R14BP2-201ENST00000426284 444 ntBASIC27.07■■□□□ 1.92
SNRPA1P09661 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC27.07■■□□□ 1.92
SNRPA1P09661 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC27.07■■□□□ 1.92
SNRPA1P09661 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
SNRPA1P09661 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SNRPA1P09661 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SNRPA1P09661 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
SNRPA1P09661 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
SNRPA1P09661 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
SNRPA1P09661 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
SNRPA1P09661 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC27.06■■□□□ 1.92
SNRPA1P09661 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
SNRPA1P09661 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC27.06■■□□□ 1.92
SNRPA1P09661 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SNRPA1P09661 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
SNRPA1P09661 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNRPA1P09661 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC27.05■■□□□ 1.92
SNRPA1P09661 AC092118.2-201ENST00000613495 667 ntBASIC27.05■■□□□ 1.92
SNRPA1P09661 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC27.05■■□□□ 1.92
SNRPA1P09661 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNRPA1P09661 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
SNRPA1P09661 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
SNRPA1P09661 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC27.05■■□□□ 1.92
SNRPA1P09661 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
SNRPA1P09661 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC27.04■■□□□ 1.92
SNRPA1P09661 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC27.04■■□□□ 1.92
SNRPA1P09661 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC27.04■■□□□ 1.92
SNRPA1P09661 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC27.04■■□□□ 1.92
SNRPA1P09661 MIR4651-201ENST00000582622 73 ntBASIC27.04■■□□□ 1.92
SNRPA1P09661 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC27.04■■□□□ 1.92
SNRPA1P09661 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC27.04■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms