Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSF1P09603 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSF1P09603 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSF1P09603 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CSF1P09603 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSF1P09603 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.21■□□□□ 0.51
CSF1P09603 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.21■□□□□ 0.51
CSF1P09603 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
CSF1P09603 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.21■□□□□ 0.51
CSF1P09603 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.21■□□□□ 0.51
CSF1P09603 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSF1P09603 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.21■□□□□ 0.51
CSF1P09603 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSF1P09603 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CSF1P09603 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.21■□□□□ 0.51
CSF1P09603 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.21■□□□□ 0.51
CSF1P09603 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.21■□□□□ 0.51
CSF1P09603 MIR4466-201ENST00000606121 54 ntBASIC18.21■□□□□ 0.51
CSF1P09603 SNX5-217ENST00000606557 1087 ntBASIC18.21■□□□□ 0.51
CSF1P09603 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CSF1P09603 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSF1P09603 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSF1P09603 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CSF1P09603 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSF1P09603 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSF1P09603 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSF1P09603 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CSF1P09603 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSF1P09603 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.21■□□□□ 0.51
CSF1P09603 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CSF1P09603 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CSF1P09603 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CSF1P09603 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.2■□□□□ 0.5
CSF1P09603 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSF1P09603 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSF1P09603 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSF1P09603 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.2■□□□□ 0.5
CSF1P09603 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSF1P09603 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSF1P09603 AC007952.6-201ENST00000573168 2673 ntBASIC18.2■□□□□ 0.5
CSF1P09603 AC003957.1-201ENST00000625108 2673 ntBASIC18.2■□□□□ 0.5
CSF1P09603 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSF1P09603 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.2■□□□□ 0.5
CSF1P09603 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSF1P09603 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSF1P09603 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSF1P09603 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CSF1P09603 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.19■□□□□ 0.5
CSF1P09603 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.19■□□□□ 0.5
CSF1P09603 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CSF1P09603 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.19■□□□□ 0.5
CSF1P09603 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSF1P09603 AC133561.4-201ENST00000566112 224 ntBASIC18.19■□□□□ 0.5
CSF1P09603 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CSF1P09603 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CSF1P09603 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSF1P09603 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CSF1P09603 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CSF1P09603 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CSF1P09603 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSF1P09603 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSF1P09603 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSF1P09603 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSF1P09603 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSF1P09603 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.18■□□□□ 0.5
CSF1P09603 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSF1P09603 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.18■□□□□ 0.5
CSF1P09603 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.18■□□□□ 0.5
CSF1P09603 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CSF1P09603 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.18■□□□□ 0.5
CSF1P09603 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSF1P09603 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSF1P09603 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSF1P09603 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSF1P09603 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSF1P09603 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CSF1P09603 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSF1P09603 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CSF1P09603 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.17■□□□□ 0.5
CSF1P09603 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSF1P09603 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CSF1P09603 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.17■□□□□ 0.5
CSF1P09603 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSF1P09603 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSF1P09603 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSF1P09603 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSF1P09603 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.17■□□□□ 0.5
CSF1P09603 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CSF1P09603 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSF1P09603 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSF1P09603 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.17■□□□□ 0.5
CSF1P09603 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSF1P09603 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.17■□□□□ 0.5
CSF1P09603 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSF1P09603 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSF1P09603 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSF1P09603 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSF1P09603 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSF1P09603 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.16■□□□□ 0.5
CSF1P09603 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms