Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
HLA-DQB2P05538 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
HLA-DQB2P05538 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.5■■□□□ 1.03
HLA-DQB2P05538 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
HLA-DQB2P05538 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.49■■□□□ 1.03
HLA-DQB2P05538 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DQB2P05538 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.49■■□□□ 1.03
HLA-DQB2P05538 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DQB2P05538 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DQB2P05538 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.49■■□□□ 1.03
HLA-DQB2P05538 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
HLA-DQB2P05538 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DQB2P05538 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.48■■□□□ 1.03
HLA-DQB2P05538 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 AC097381.1-201ENST00000429019 1296 ntBASIC21.47■■□□□ 1.03
HLA-DQB2P05538 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 DUX4L2-201ENST00000561772 1275 ntBASIC21.47■■□□□ 1.03
HLA-DQB2P05538 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 DUX4L6-201ENST00000626483 1275 ntBASIC21.47■■□□□ 1.03
HLA-DQB2P05538 DUX4L1-201ENST00000627662 1275 ntBASIC21.47■■□□□ 1.03
HLA-DQB2P05538 DUX4L8-201ENST00000629013 1275 ntBASIC21.47■■□□□ 1.03
HLA-DQB2P05538 DUX4L3-201ENST00000630187 1275 ntBASIC21.47■■□□□ 1.03
HLA-DQB2P05538 DUX4L7-201ENST00000630678 1275 ntBASIC21.47■■□□□ 1.03
HLA-DQB2P05538 DUX4L5-201ENST00000630834 1275 ntBASIC21.47■■□□□ 1.03
HLA-DQB2P05538 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DQB2P05538 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 AC053503.5-201ENST00000601508 636 ntBASIC21.46■■□□□ 1.03
HLA-DQB2P05538 AC087623.3-201ENST00000607047 1098 ntBASIC21.46■■□□□ 1.03
HLA-DQB2P05538 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DQB2P05538 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
HLA-DQB2P05538 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
HLA-DQB2P05538 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DQB2P05538 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DQB2P05538 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DQB2P05538 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.45■■□□□ 1.02
HLA-DQB2P05538 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.45■■□□□ 1.02
HLA-DQB2P05538 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.45■■□□□ 1.02
HLA-DQB2P05538 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DQB2P05538 MIR6821-201ENST00000617625 74 ntBASIC21.45■■□□□ 1.02
HLA-DQB2P05538 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DQB2P05538 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.45■■□□□ 1.02
HLA-DQB2P05538 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DQB2P05538 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DQB2P05538 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DQB2P05538 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DQB2P05538 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.44■■□□□ 1.02
HLA-DQB2P05538 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DQB2P05538 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.44■■□□□ 1.02
HLA-DQB2P05538 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.44■■□□□ 1.02
HLA-DQB2P05538 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.44■■□□□ 1.02
HLA-DQB2P05538 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DQB2P05538 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms