Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.78■□□□□ 0.92
GDF9O60383 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDF9O60383 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDF9O60383 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.78■□□□□ 0.92
GDF9O60383 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GDF9O60383 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
GDF9O60383 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDF9O60383 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GDF9O60383 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDF9O60383 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDF9O60383 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
GDF9O60383 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GDF9O60383 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GDF9O60383 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
GDF9O60383 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.77■□□□□ 0.92
GDF9O60383 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
GDF9O60383 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.77■□□□□ 0.92
GDF9O60383 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
GDF9O60383 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDF9O60383 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.77■□□□□ 0.92
GDF9O60383 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.77■□□□□ 0.92
GDF9O60383 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.77■□□□□ 0.91
GDF9O60383 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
GDF9O60383 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
GDF9O60383 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
GDF9O60383 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GDF9O60383 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.76■□□□□ 0.91
GDF9O60383 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
GDF9O60383 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.76■□□□□ 0.91
GDF9O60383 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF9O60383 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF9O60383 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
GDF9O60383 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF9O60383 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF9O60383 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.76■□□□□ 0.91
GDF9O60383 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.76■□□□□ 0.91
GDF9O60383 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.76■□□□□ 0.91
GDF9O60383 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
GDF9O60383 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.76■□□□□ 0.91
GDF9O60383 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF9O60383 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF9O60383 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF9O60383 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GDF9O60383 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF9O60383 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
GDF9O60383 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.75■□□□□ 0.91
GDF9O60383 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GDF9O60383 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
GDF9O60383 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF9O60383 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF9O60383 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GDF9O60383 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.75■□□□□ 0.91
GDF9O60383 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF9O60383 BX088651.1-201ENST00000540551 451 ntBASIC20.75■□□□□ 0.91
GDF9O60383 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GDF9O60383 AL162412.1-201ENST00000567129 965 ntBASIC20.75■□□□□ 0.91
GDF9O60383 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.75■□□□□ 0.91
GDF9O60383 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.75■□□□□ 0.91
GDF9O60383 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF9O60383 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF9O60383 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF9O60383 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GDF9O60383 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.74■□□□□ 0.91
GDF9O60383 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDF9O60383 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDF9O60383 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
GDF9O60383 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
GDF9O60383 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDF9O60383 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
GDF9O60383 AC079089.2-201ENST00000531211 1277 ntBASIC20.74■□□□□ 0.91
GDF9O60383 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.74■□□□□ 0.91
GDF9O60383 AC120498.10-201ENST00000621827 505 ntBASIC20.74■□□□□ 0.91
GDF9O60383 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
GDF9O60383 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDF9O60383 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GDF9O60383 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GDF9O60383 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GDF9O60383 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
GDF9O60383 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
GDF9O60383 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.73■□□□□ 0.91
GDF9O60383 AC233263.1-201ENST00000578059 224 ntBASIC20.73■□□□□ 0.91
GDF9O60383 RN7SL471P-201ENST00000580476 299 ntBASIC20.73■□□□□ 0.91
GDF9O60383 AC060766.5-201ENST00000590539 871 ntBASIC20.73■□□□□ 0.91
GDF9O60383 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.73■□□□□ 0.91
GDF9O60383 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.73■□□□□ 0.91
GDF9O60383 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
GDF9O60383 KRT17P1-201ENST00000399211 1546 ntBASIC20.73■□□□□ 0.91
GDF9O60383 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
GDF9O60383 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.72■□□□□ 0.91
GDF9O60383 RBM17P2-201ENST00000616397 1405 ntBASIC20.72■□□□□ 0.91
GDF9O60383 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.72■□□□□ 0.91
GDF9O60383 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF9O60383 AL355472.2-201ENST00000422958 438 ntBASIC20.72■□□□□ 0.91
GDF9O60383 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.72■□□□□ 0.91
GDF9O60383 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
GDF9O60383 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.72■□□□□ 0.91
GDF9O60383 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
GDF9O60383 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDF9O60383 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.72■□□□□ 0.91
GDF9O60383 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms