Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.68■■□□□ 1.22
SPTLC1O15269 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.68■■□□□ 1.22
SPTLC1O15269 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.68■■□□□ 1.22
SPTLC1O15269 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
SPTLC1O15269 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.68■■□□□ 1.22
SPTLC1O15269 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.68■■□□□ 1.22
SPTLC1O15269 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SPTLC1O15269 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SPTLC1O15269 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.67■■□□□ 1.22
SPTLC1O15269 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SPTLC1O15269 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SPTLC1O15269 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
SPTLC1O15269 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SPTLC1O15269 KRT18P20-201ENST00000548986 1279 ntBASIC22.67■■□□□ 1.22
SPTLC1O15269 DUX4L16-201ENST00000555130 1264 ntBASIC22.67■■□□□ 1.22
SPTLC1O15269 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.67■■□□□ 1.22
SPTLC1O15269 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
SPTLC1O15269 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.67■■□□□ 1.22
SPTLC1O15269 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SPTLC1O15269 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SPTLC1O15269 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.67■■□□□ 1.22
SPTLC1O15269 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPTLC1O15269 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.66■■□□□ 1.22
SPTLC1O15269 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SPTLC1O15269 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SPTLC1O15269 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SPTLC1O15269 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPTLC1O15269 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPTLC1O15269 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.66■■□□□ 1.22
SPTLC1O15269 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.66■■□□□ 1.22
SPTLC1O15269 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPTLC1O15269 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPTLC1O15269 AC012676.1-201ENST00000574705 1949 ntBASIC22.66■■□□□ 1.22
SPTLC1O15269 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SPTLC1O15269 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SPTLC1O15269 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPTLC1O15269 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPTLC1O15269 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPTLC1O15269 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SPTLC1O15269 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.65■■□□□ 1.22
SPTLC1O15269 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.65■■□□□ 1.22
SPTLC1O15269 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.65■■□□□ 1.22
SPTLC1O15269 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPTLC1O15269 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPTLC1O15269 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPTLC1O15269 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPTLC1O15269 CROCCP5-201ENST00000436658 830 ntBASIC22.65■■□□□ 1.22
SPTLC1O15269 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.65■■□□□ 1.22
SPTLC1O15269 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.65■■□□□ 1.22
SPTLC1O15269 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.65■■□□□ 1.22
SPTLC1O15269 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
SPTLC1O15269 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPTLC1O15269 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPTLC1O15269 AC061975.6-201ENST00000579045 1553 ntBASIC22.64■■□□□ 1.22
SPTLC1O15269 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SPTLC1O15269 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SPTLC1O15269 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SPTLC1O15269 AC026185.1-201ENST00000445748 174 ntBASIC22.64■■□□□ 1.21
SPTLC1O15269 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SPTLC1O15269 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SPTLC1O15269 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SPTLC1O15269 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SPTLC1O15269 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.64■■□□□ 1.21
SPTLC1O15269 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
SPTLC1O15269 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.63■■□□□ 1.21
SPTLC1O15269 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.63■■□□□ 1.21
SPTLC1O15269 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.63■■□□□ 1.21
SPTLC1O15269 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SPTLC1O15269 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
SPTLC1O15269 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SPTLC1O15269 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.63■■□□□ 1.21
SPTLC1O15269 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.63■■□□□ 1.21
SPTLC1O15269 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SPTLC1O15269 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.63■■□□□ 1.21
SPTLC1O15269 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SPTLC1O15269 TMEM191A-211ENST00000637163 1067 ntBASIC22.63■■□□□ 1.21
SPTLC1O15269 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SPTLC1O15269 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SPTLC1O15269 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
SPTLC1O15269 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SPTLC1O15269 AL117328.2-201ENST00000624617 1940 ntBASIC22.63■■□□□ 1.21
SPTLC1O15269 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.62■■□□□ 1.21
SPTLC1O15269 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.62■■□□□ 1.21
SPTLC1O15269 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SPTLC1O15269 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SPTLC1O15269 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.62■■□□□ 1.21
SPTLC1O15269 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SPTLC1O15269 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.62■■□□□ 1.21
SPTLC1O15269 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SPTLC1O15269 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SPTLC1O15269 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SPTLC1O15269 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SPTLC1O15269 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
SPTLC1O15269 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SPTLC1O15269 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SPTLC1O15269 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SPTLC1O15269 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SPTLC1O15269 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SPTLC1O15269 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.61■■□□□ 1.21
SPTLC1O15269 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms