Protein–RNA interactions for Protein: O15232

MATN3, Matrilin-3, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3O15232 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
MATN3O15232 KRT87P-202ENST00000534226 1464 ntBASIC21.56■■□□□ 1.04
MATN3O15232 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.56■■□□□ 1.04
MATN3O15232 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.56■■□□□ 1.04
MATN3O15232 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.56■■□□□ 1.04
MATN3O15232 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MATN3O15232 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.55■■□□□ 1.04
MATN3O15232 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MATN3O15232 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MATN3O15232 AC007375.3-201ENST00000600936 2314 ntBASIC21.55■■□□□ 1.04
MATN3O15232 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MATN3O15232 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.55■■□□□ 1.04
MATN3O15232 KRT18P14-201ENST00000534205 1250 ntBASIC21.55■■□□□ 1.04
MATN3O15232 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MATN3O15232 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.55■■□□□ 1.04
MATN3O15232 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.55■■□□□ 1.04
MATN3O15232 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MATN3O15232 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
MATN3O15232 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.55■■□□□ 1.04
MATN3O15232 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MATN3O15232 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MATN3O15232 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.55■■□□□ 1.04
MATN3O15232 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MATN3O15232 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MATN3O15232 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.55■■□□□ 1.04
MATN3O15232 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MATN3O15232 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MATN3O15232 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MATN3O15232 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
MATN3O15232 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MATN3O15232 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MATN3O15232 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
MATN3O15232 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MATN3O15232 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.54■■□□□ 1.04
MATN3O15232 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MATN3O15232 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.54■■□□□ 1.04
MATN3O15232 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
MATN3O15232 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
MATN3O15232 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MATN3O15232 CLDN5-201ENST00000403084 2357 ntBASIC21.54■■□□□ 1.04
MATN3O15232 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MATN3O15232 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MATN3O15232 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.54■■□□□ 1.04
MATN3O15232 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.54■■□□□ 1.04
MATN3O15232 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
MATN3O15232 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
MATN3O15232 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MATN3O15232 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MATN3O15232 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.53■■□□□ 1.04
MATN3O15232 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MATN3O15232 AC097381.1-201ENST00000429019 1296 ntBASIC21.53■■□□□ 1.04
MATN3O15232 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
MATN3O15232 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.53■■□□□ 1.04
MATN3O15232 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
MATN3O15232 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MATN3O15232 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MATN3O15232 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.52■■□□□ 1.04
MATN3O15232 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.52■■□□□ 1.04
MATN3O15232 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.52■■□□□ 1.04
MATN3O15232 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.52■■□□□ 1.04
MATN3O15232 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
MATN3O15232 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MATN3O15232 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.52■■□□□ 1.04
MATN3O15232 MIR6821-201ENST00000617625 74 ntBASIC21.52■■□□□ 1.04
MATN3O15232 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
MATN3O15232 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.52■■□□□ 1.04
MATN3O15232 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
MATN3O15232 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.52■■□□□ 1.04
MATN3O15232 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MATN3O15232 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
MATN3O15232 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
MATN3O15232 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MATN3O15232 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MATN3O15232 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
MATN3O15232 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.51■■□□□ 1.03
MATN3O15232 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
MATN3O15232 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MATN3O15232 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MATN3O15232 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.51■■□□□ 1.03
MATN3O15232 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MATN3O15232 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
MATN3O15232 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MATN3O15232 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MATN3O15232 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MATN3O15232 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.5■■□□□ 1.03
MATN3O15232 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MATN3O15232 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.5■■□□□ 1.03
MATN3O15232 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.5■■□□□ 1.03
MATN3O15232 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MATN3O15232 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.5■■□□□ 1.03
MATN3O15232 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.5■■□□□ 1.03
MATN3O15232 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.5■■□□□ 1.03
MATN3O15232 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.5■■□□□ 1.03
MATN3O15232 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MATN3O15232 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MATN3O15232 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
MATN3O15232 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.49■■□□□ 1.03
MATN3O15232 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.49■■□□□ 1.03
MATN3O15232 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.49■■□□□ 1.03
MATN3O15232 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms