Protein–RNA interactions for Protein: A8MYP8

ODF3B, Outer dense fiber protein 3B, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3BA8MYP8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ODF3BA8MYP8 AC016769.1-201ENST00000409132 1010 ntBASIC17.11■□□□□ 0.33
ODF3BA8MYP8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ODF3BA8MYP8 UBE2DNL-204ENST00000602536 740 ntBASIC17.11■□□□□ 0.33
ODF3BA8MYP8 AC092666.2-201ENST00000613287 246 ntBASIC17.11■□□□□ 0.33
ODF3BA8MYP8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ODF3BA8MYP8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.11■□□□□ 0.33
ODF3BA8MYP8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.11■□□□□ 0.33
ODF3BA8MYP8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ODF3BA8MYP8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.11■□□□□ 0.33
ODF3BA8MYP8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.11■□□□□ 0.33
ODF3BA8MYP8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ODF3BA8MYP8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ODF3BA8MYP8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ODF3BA8MYP8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.1■□□□□ 0.33
ODF3BA8MYP8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ODF3BA8MYP8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ODF3BA8MYP8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.1■□□□□ 0.33
ODF3BA8MYP8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
ODF3BA8MYP8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.1■□□□□ 0.33
ODF3BA8MYP8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.1■□□□□ 0.33
ODF3BA8MYP8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ODF3BA8MYP8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ODF3BA8MYP8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ODF3BA8MYP8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ODF3BA8MYP8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.1■□□□□ 0.33
ODF3BA8MYP8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 SLC7A5P1-201ENST00000568957 537 ntBASIC17.09■□□□□ 0.33
ODF3BA8MYP8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 AL137784.2-201ENST00000607332 1000 ntBASIC17.09■□□□□ 0.33
ODF3BA8MYP8 MYCNOS-205ENST00000641950 531 ntBASIC17.09■□□□□ 0.33
ODF3BA8MYP8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 AC244015.2-201ENST00000616358 1861 ntBASIC17.09■□□□□ 0.33
ODF3BA8MYP8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ODF3BA8MYP8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ODF3BA8MYP8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ODF3BA8MYP8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ODF3BA8MYP8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.08■□□□□ 0.33
ODF3BA8MYP8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ODF3BA8MYP8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.08■□□□□ 0.33
ODF3BA8MYP8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.08■□□□□ 0.33
ODF3BA8MYP8 AC061975.6-201ENST00000579045 1553 ntBASIC17.08■□□□□ 0.32
ODF3BA8MYP8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ODF3BA8MYP8 KRT16P2-201ENST00000414673 1423 ntBASIC17.08■□□□□ 0.32
ODF3BA8MYP8 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.08■□□□□ 0.32
ODF3BA8MYP8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ODF3BA8MYP8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ODF3BA8MYP8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.08■□□□□ 0.32
ODF3BA8MYP8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.08■□□□□ 0.32
ODF3BA8MYP8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.08■□□□□ 0.32
ODF3BA8MYP8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.08■□□□□ 0.32
ODF3BA8MYP8 AC120498.10-201ENST00000621827 505 ntBASIC17.08■□□□□ 0.32
ODF3BA8MYP8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.08■□□□□ 0.32
ODF3BA8MYP8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ODF3BA8MYP8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ODF3BA8MYP8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ODF3BA8MYP8 FBXW4P1-201ENST00000426721 2239 ntBASIC17.08■□□□□ 0.32
ODF3BA8MYP8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ODF3BA8MYP8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ODF3BA8MYP8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ODF3BA8MYP8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ODF3BA8MYP8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ODF3BA8MYP8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ODF3BA8MYP8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ODF3BA8MYP8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
ODF3BA8MYP8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ODF3BA8MYP8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ODF3BA8MYP8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ODF3BA8MYP8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.07■□□□□ 0.32
ODF3BA8MYP8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ODF3BA8MYP8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ODF3BA8MYP8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ODF3BA8MYP8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ODF3BA8MYP8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.07■□□□□ 0.32
ODF3BA8MYP8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms