Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MBP-211ENST00000397875 2168 ntTSL 5 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 LOXHD1-207ENST00000441551 6226 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 MYH13-203ENST00000621918 5916 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 PAQR5-202ENST00000395407 5337 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 AC004832.6-202ENST00000366413 696 ntBASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 SLAMF9-202ENST00000368093 1156 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 PACRG-AS3-201ENST00000419182 1131 ntTSL 2 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 SHANK2-AS2-201ENST00000429268 356 ntTSL 2 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 CDRT15P2-201ENST00000447470 416 ntBASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 AL133163.1-201ENST00000459899 949 ntBASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 CMSS1-205ENST00000489081 1056 ntTSL 2 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 RN7SL166P-201ENST00000489872 280 ntBASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 AC091849.2-201ENST00000503113 692 ntTSL 3 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 LINC00499-202ENST00000507145 540 ntTSL 4 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 LINC00592-201ENST00000549830 1044 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 AC024361.1-201ENST00000572594 642 ntBASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 AC090282.1-202ENST00000575487 515 ntTSL 4 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 PPY-205ENST00000591228 499 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 AC067969.2-201ENST00000597015 570 ntTSL 4 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 GGNBP1-206ENST00000618642 897 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 NASP-225ENST00000629893 253 ntTSL 5 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 LINC01002-226ENST00000633344 806 ntTSL 5 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 LINC01002-233ENST00000633773 609 ntTSL 5 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 AC024568.1-201ENST00000517330 2260 ntBASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 SPDL1-201ENST00000265295 2668 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 LDLRAD3-201ENST00000315571 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 CICP3-201ENST00000440782 2455 ntBASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 AL356234.1-201ENST00000404534 1779 ntBASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 LINC00910-202ENST00000586231 2890 ntTSL 2 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 IMMT-202ENST00000409051 2515 ntTSL 2 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 TMEM159-202ENST00000261388 1812 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 ZAN-205ENST00000613979 8669 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 ZNF264-201ENST00000263095 12163 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 C19orf44-201ENST00000221671 3427 ntAPPRIS P3 TSL 2 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 REG4-202ENST00000354219 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 TTC14-203ENST00000412756 4568 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AC104794.2-201ENST00000567540 1572 ntBASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 DBH-202ENST00000393056 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 PCDH11Y-207ENST00000622698 4824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 MAPK10-203ENST00000361569 2434 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 FOSB-210ENST00000591858 3658 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 PCDHGA7-202ENST00000617050 3262 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 CFAP43-204ENST00000369720 2876 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 PPME1-202ENST00000398427 2496 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 DNAI2-202ENST00000446837 2474 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 RBM10-203ENST00000377604 3747 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 PARD3B-201ENST00000349953 3315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 NUTM1-204ENST00000614490 4196 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 MRPL21-201ENST00000362034 683 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 EXOSC1-204ENST00000370902 923 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 PDZK1IP1-202ENST00000371885 770 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 MIR1273A-201ENST00000408826 103 ntBASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 RBFOX2-208ENST00000416721 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AL772202.1-201ENST00000421482 391 ntTSL 2 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 LINC01320-201ENST00000423663 1109 ntTSL 2 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AL353572.2-201ENST00000427728 748 ntBASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 ATP5G1P4-201ENST00000430660 441 ntBASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AL590408.1-201ENST00000430905 453 ntTSL 3 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 TAS2R62P-201ENST00000433466 940 ntBASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 MYL6P2-201ENST00000450079 434 ntBASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 DDX11L1-201ENST00000450305 632 ntBASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AP000322.1-201ENST00000450895 1050 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 VN1R28P-201ENST00000452517 896 ntBASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AL731547.1-201ENST00000457930 389 ntBASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 WASH6P-207ENST00000476066 720 ntTSL 5 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 RN7SL813P-201ENST00000489529 283 ntBASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AC011362.1-201ENST00000507050 485 ntTSL 2 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 TRIQK-213ENST00000521617 774 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AP001931.1-201ENST00000531074 580 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 TAOK3-205ENST00000536979 777 ntTSL 2 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AC079905.2-201ENST00000550105 247 ntBASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AC012555.1-201ENST00000551650 674 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AC103996.2-201ENST00000556763 915 ntTSL 3 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 DNM1P38-201ENST00000560794 433 ntBASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AC009107.2-201ENST00000569580 577 ntTSL 4 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AC009088.4-201ENST00000575892 280 ntBASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AC090376.1-202ENST00000587276 470 ntTSL 3 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AC090386.1-201ENST00000588766 464 ntTSL 3 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AC010624.3-202ENST00000599410 562 ntTSL 4 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AC009061.2-204ENST00000602476 524 ntTSL 3 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AC068620.2-201ENST00000602927 529 ntBASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 DAZAP2-215ENST00000604900 1045 ntTSL 3 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 AL158850.2-204ENST00000616537 1188 ntTSL 5 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 CU633980.2-201ENST00000624951 1050 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 SAMHD1-201ENST00000262878 4784 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 PTPN2-201ENST00000309660 3467 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 POGLUT1-201ENST00000295588 3533 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 WDR31-201ENST00000341761 4862 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 PACRG-AS3-202ENST00000612841 1766 ntTSL 2 BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 MERTK-203ENST00000421804 3600 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 CCDC81-204ENST00000528728 1814 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 PRAMEF31P-201ENST00000504262 1371 ntBASIC10.23□□□□□ -0.77
NPIPA3F8WFD2 ZNF827-201ENST00000379448 4197 ntAPPRIS P3 TSL 2 BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 1293 ms