Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC105233.4-201ENST00000642045 216 ntBASIC15.92■□□□□ 0.14
HLA-DRB4X5D2U9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DRB4X5D2U9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DRB4X5D2U9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DRB4X5D2U9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DRB4X5D2U9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 AC073130.3-201ENST00000624389 2278 ntBASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DRB4X5D2U9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DRB4X5D2U9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRB4X5D2U9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRB4X5D2U9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRB4X5D2U9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.87■□□□□ 0.13
HLA-DRB4X5D2U9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRB4X5D2U9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRB4X5D2U9 AC105265.2-201ENST00000467189 838 ntBASIC15.87■□□□□ 0.13
HLA-DRB4X5D2U9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRB4X5D2U9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRB4X5D2U9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRB4X5D2U9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRB4X5D2U9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRB4X5D2U9 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.87■□□□□ 0.13
HLA-DRB4X5D2U9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
HLA-DRB4X5D2U9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms