Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 KRT19P1-201ENST00000405746 1186 ntBASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 AC010141.2-201ENST00000452426 721 ntBASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN16Q9Y5I7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN16Q9Y5I7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN16Q9Y5I7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.83■□□□□ 0.76
CLDN16Q9Y5I7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
CLDN16Q9Y5I7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 AC006015.1-201ENST00000429970 570 ntBASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN16Q9Y5I7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 AP001160.3-201ENST00000601484 763 ntBASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLDN16Q9Y5I7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 LINC00565-201ENST00000562710 2331 ntBASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN16Q9Y5I7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN16Q9Y5I7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLDN16Q9Y5I7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN16Q9Y5I7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLDN16Q9Y5I7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN16Q9Y5I7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN16Q9Y5I7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms