Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.4■■□□□ 1.34
PCDHB13Q9Y5F0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHB13Q9Y5F0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHB13Q9Y5F0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.39■■□□□ 1.34
PCDHB13Q9Y5F0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.39■■□□□ 1.34
PCDHB13Q9Y5F0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHB13Q9Y5F0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
PCDHB13Q9Y5F0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.39■■□□□ 1.33
PCDHB13Q9Y5F0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.39■■□□□ 1.33
PCDHB13Q9Y5F0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.39■■□□□ 1.33
PCDHB13Q9Y5F0 TERF1P2-201ENST00000583350 1212 ntBASIC23.39■■□□□ 1.33
PCDHB13Q9Y5F0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.39■■□□□ 1.33
PCDHB13Q9Y5F0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.39■■□□□ 1.33
PCDHB13Q9Y5F0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHB13Q9Y5F0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHB13Q9Y5F0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.39■■□□□ 1.33
PCDHB13Q9Y5F0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHB13Q9Y5F0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
PCDHB13Q9Y5F0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
PCDHB13Q9Y5F0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
PCDHB13Q9Y5F0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB13Q9Y5F0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB13Q9Y5F0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB13Q9Y5F0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB13Q9Y5F0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.38■■□□□ 1.33
PCDHB13Q9Y5F0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB13Q9Y5F0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDHB13Q9Y5F0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDHB13Q9Y5F0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB13Q9Y5F0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB13Q9Y5F0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB13Q9Y5F0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDHB13Q9Y5F0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB13Q9Y5F0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
PCDHB13Q9Y5F0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB13Q9Y5F0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB13Q9Y5F0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB13Q9Y5F0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.37■■□□□ 1.33
PCDHB13Q9Y5F0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.37■■□□□ 1.33
PCDHB13Q9Y5F0 AC079140.4-201ENST00000507448 529 ntBASIC23.37■■□□□ 1.33
PCDHB13Q9Y5F0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB13Q9Y5F0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB13Q9Y5F0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.37■■□□□ 1.33
PCDHB13Q9Y5F0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB13Q9Y5F0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB13Q9Y5F0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHB13Q9Y5F0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB13Q9Y5F0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB13Q9Y5F0 CCDC92B-201ENST00000575506 885 ntBASIC23.36■■□□□ 1.33
PCDHB13Q9Y5F0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB13Q9Y5F0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB13Q9Y5F0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHB13Q9Y5F0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHB13Q9Y5F0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB13Q9Y5F0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHB13Q9Y5F0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB13Q9Y5F0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PCDHB13Q9Y5F0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB13Q9Y5F0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB13Q9Y5F0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB13Q9Y5F0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB13Q9Y5F0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDHB13Q9Y5F0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB13Q9Y5F0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB13Q9Y5F0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
PCDHB13Q9Y5F0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB13Q9Y5F0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB13Q9Y5F0 CLDN5-201ENST00000403084 2357 ntBASIC23.35■■□□□ 1.33
PCDHB13Q9Y5F0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB13Q9Y5F0 AC007375.3-201ENST00000600936 2314 ntBASIC23.34■■□□□ 1.33
PCDHB13Q9Y5F0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB13Q9Y5F0 PKD1P6-201ENST00000343738 4769 ntBASIC23.34■■□□□ 1.33
PCDHB13Q9Y5F0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHB13Q9Y5F0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB13Q9Y5F0 AC097381.1-201ENST00000429019 1296 ntBASIC23.34■■□□□ 1.33
PCDHB13Q9Y5F0 KRT18P14-201ENST00000534205 1250 ntBASIC23.34■■□□□ 1.33
PCDHB13Q9Y5F0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB13Q9Y5F0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB13Q9Y5F0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB13Q9Y5F0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB13Q9Y5F0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB13Q9Y5F0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHB13Q9Y5F0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHB13Q9Y5F0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDHB13Q9Y5F0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHB13Q9Y5F0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PCDHB13Q9Y5F0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHB13Q9Y5F0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHB13Q9Y5F0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHB13Q9Y5F0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHB13Q9Y5F0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
PCDHB13Q9Y5F0 MIR6821-201ENST00000617625 74 ntBASIC23.33■■□□□ 1.33
PCDHB13Q9Y5F0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDHB13Q9Y5F0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.33
PCDHB13Q9Y5F0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.33■■□□□ 1.32
PCDHB13Q9Y5F0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHB13Q9Y5F0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHB13Q9Y5F0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHB13Q9Y5F0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHB13Q9Y5F0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms