Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
COPS3Q9UNS2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.84■□□□□ 0.61
COPS3Q9UNS2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COPS3Q9UNS2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COPS3Q9UNS2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.83■□□□□ 0.61
COPS3Q9UNS2 AC003102.1-202ENST00000563394 1796 ntBASIC18.83■□□□□ 0.61
COPS3Q9UNS2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COPS3Q9UNS2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COPS3Q9UNS2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COPS3Q9UNS2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COPS3Q9UNS2 SERBP1P1-201ENST00000396021 1160 ntBASIC18.83■□□□□ 0.6
COPS3Q9UNS2 AC092171.4-201ENST00000609130 632 ntBASIC18.83■□□□□ 0.6
COPS3Q9UNS2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
COPS3Q9UNS2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
COPS3Q9UNS2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COPS3Q9UNS2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 AL391422.3-201ENST00000603791 2761 ntBASIC18.82■□□□□ 0.6
COPS3Q9UNS2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 AP004607.7-201ENST00000527152 1677 ntBASIC18.82■□□□□ 0.6
COPS3Q9UNS2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COPS3Q9UNS2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPS3Q9UNS2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 AL034346.1-201ENST00000568244 1277 ntBASIC18.8■□□□□ 0.6
COPS3Q9UNS2 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms