Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NLGN3Q9NZ94 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NLGN3Q9NZ94 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NLGN3Q9NZ94 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.77■□□□□ 0.92
NLGN3Q9NZ94 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.77■□□□□ 0.92
NLGN3Q9NZ94 AC073210.2-201ENST00000430369 194 ntBASIC20.77■□□□□ 0.92
NLGN3Q9NZ94 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NLGN3Q9NZ94 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NLGN3Q9NZ94 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.77■□□□□ 0.92
NLGN3Q9NZ94 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NLGN3Q9NZ94 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NLGN3Q9NZ94 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NLGN3Q9NZ94 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NLGN3Q9NZ94 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.77■□□□□ 0.91
NLGN3Q9NZ94 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.77■□□□□ 0.91
NLGN3Q9NZ94 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NLGN3Q9NZ94 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.76■□□□□ 0.91
NLGN3Q9NZ94 AC079834.2-201ENST00000609776 1949 ntBASIC20.76■□□□□ 0.91
NLGN3Q9NZ94 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NLGN3Q9NZ94 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NLGN3Q9NZ94 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NLGN3Q9NZ94 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.76■□□□□ 0.91
NLGN3Q9NZ94 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NLGN3Q9NZ94 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NLGN3Q9NZ94 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.76■□□□□ 0.91
NLGN3Q9NZ94 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NLGN3Q9NZ94 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NLGN3Q9NZ94 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.76■□□□□ 0.91
NLGN3Q9NZ94 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NLGN3Q9NZ94 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 TSPY20P-201ENST00000450910 630 ntBASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 AC007322.4-201ENST00000509611 723 ntBASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NLGN3Q9NZ94 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
NLGN3Q9NZ94 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NLGN3Q9NZ94 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.73■□□□□ 0.91
NLGN3Q9NZ94 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NLGN3Q9NZ94 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NLGN3Q9NZ94 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.73■□□□□ 0.91
NLGN3Q9NZ94 AC068338.2-201ENST00000563278 1430 ntBASIC20.73■□□□□ 0.91
NLGN3Q9NZ94 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NLGN3Q9NZ94 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
NLGN3Q9NZ94 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.73■□□□□ 0.91
NLGN3Q9NZ94 AC120498.10-201ENST00000621827 505 ntBASIC20.73■□□□□ 0.91
NLGN3Q9NZ94 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NLGN3Q9NZ94 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NLGN3Q9NZ94 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NLGN3Q9NZ94 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.72■□□□□ 0.91
NLGN3Q9NZ94 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLGN3Q9NZ94 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLGN3Q9NZ94 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLGN3Q9NZ94 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLGN3Q9NZ94 CYP2T1P-201ENST00000432607 1285 ntBASIC20.72■□□□□ 0.91
NLGN3Q9NZ94 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.72■□□□□ 0.91
NLGN3Q9NZ94 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.72■□□□□ 0.91
NLGN3Q9NZ94 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.72■□□□□ 0.91
NLGN3Q9NZ94 AC008175.2-201ENST00000612840 297 ntBASIC20.72■□□□□ 0.91
NLGN3Q9NZ94 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLGN3Q9NZ94 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLGN3Q9NZ94 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.72■□□□□ 0.91
NLGN3Q9NZ94 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLGN3Q9NZ94 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLGN3Q9NZ94 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLGN3Q9NZ94 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.71■□□□□ 0.91
NLGN3Q9NZ94 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NLGN3Q9NZ94 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NLGN3Q9NZ94 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NLGN3Q9NZ94 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.71■□□□□ 0.91
NLGN3Q9NZ94 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms