Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AC003102.1-202ENST00000563394 1796 ntBASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42SE2Q9NRR3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDC42SE2Q9NRR3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.58□□□□□ -0.07
CDC42SE2Q9NRR3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDC42SE2Q9NRR3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
CDC42SE2Q9NRR3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CDC42SE2Q9NRR3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDC42SE2Q9NRR3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42SE2Q9NRR3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42SE2Q9NRR3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42SE2Q9NRR3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42SE2Q9NRR3 AC010525.1-201ENST00000585559 441 ntBASIC14.58□□□□□ -0.08
CDC42SE2Q9NRR3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.58□□□□□ -0.08
CDC42SE2Q9NRR3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDC42SE2Q9NRR3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42SE2Q9NRR3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42SE2Q9NRR3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42SE2Q9NRR3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42SE2Q9NRR3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
CDC42SE2Q9NRR3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
CDC42SE2Q9NRR3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42SE2Q9NRR3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42SE2Q9NRR3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.57□□□□□ -0.08
CDC42SE2Q9NRR3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42SE2Q9NRR3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 AL138724.1-201ENST00000606771 1088 ntBASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42SE2Q9NRR3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDC42SE2Q9NRR3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms