Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 AC007375.3-201ENST00000600936 2314 ntBASIC26.75■■□□□ 1.87
CHMP4BQ9H444 IRS3P-201ENST00000223076 1006 ntBASIC26.75■■□□□ 1.87
CHMP4BQ9H444 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.74■■□□□ 1.87
CHMP4BQ9H444 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
CHMP4BQ9H444 MIR638-201ENST00000385237 100 ntBASIC26.74■■□□□ 1.87
CHMP4BQ9H444 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.74■■□□□ 1.87
CHMP4BQ9H444 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.74■■□□□ 1.87
CHMP4BQ9H444 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.74■■□□□ 1.87
CHMP4BQ9H444 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.74■■□□□ 1.87
CHMP4BQ9H444 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC26.74■■□□□ 1.87
CHMP4BQ9H444 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
CHMP4BQ9H444 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
CHMP4BQ9H444 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC26.74■■□□□ 1.87
CHMP4BQ9H444 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CHMP4BQ9H444 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC26.74■■□□□ 1.87
CHMP4BQ9H444 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CHMP4BQ9H444 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHMP4BQ9H444 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
CHMP4BQ9H444 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CHMP4BQ9H444 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CHMP4BQ9H444 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CHMP4BQ9H444 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.72■■□□□ 1.87
CHMP4BQ9H444 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CHMP4BQ9H444 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CHMP4BQ9H444 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.72■■□□□ 1.87
CHMP4BQ9H444 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CHMP4BQ9H444 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC26.71■■□□□ 1.87
CHMP4BQ9H444 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26.71■■□□□ 1.87
CHMP4BQ9H444 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
CHMP4BQ9H444 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
CHMP4BQ9H444 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
CHMP4BQ9H444 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CHMP4BQ9H444 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CHMP4BQ9H444 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.71■■□□□ 1.87
CHMP4BQ9H444 CPT2-209ENST00000636935 803 ntTSL 5 BASIC26.71■■□□□ 1.87
CHMP4BQ9H444 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CHMP4BQ9H444 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CHMP4BQ9H444 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC26.71■■□□□ 1.87
CHMP4BQ9H444 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC26.7■■□□□ 1.87
CHMP4BQ9H444 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC26.7■■□□□ 1.87
CHMP4BQ9H444 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
CHMP4BQ9H444 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHMP4BQ9H444 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHMP4BQ9H444 AC105265.2-201ENST00000467189 838 ntBASIC26.7■■□□□ 1.86
CHMP4BQ9H444 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.7■■□□□ 1.86
CHMP4BQ9H444 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHMP4BQ9H444 PARN-205ENST00000539279 1557 ntTSL 2 BASIC26.7■■□□□ 1.86
CHMP4BQ9H444 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHMP4BQ9H444 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHMP4BQ9H444 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHMP4BQ9H444 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC26.69■■□□□ 1.86
CHMP4BQ9H444 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
CHMP4BQ9H444 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHMP4BQ9H444 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.69■■□□□ 1.86
CHMP4BQ9H444 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.69■■□□□ 1.86
CHMP4BQ9H444 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC26.69■■□□□ 1.86
CHMP4BQ9H444 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.69■■□□□ 1.86
CHMP4BQ9H444 TPRG1LP1-201ENST00000598702 760 ntBASIC26.69■■□□□ 1.86
CHMP4BQ9H444 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHMP4BQ9H444 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
CHMP4BQ9H444 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC26.68■■□□□ 1.86
CHMP4BQ9H444 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHMP4BQ9H444 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
CHMP4BQ9H444 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHMP4BQ9H444 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHMP4BQ9H444 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHMP4BQ9H444 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHMP4BQ9H444 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHMP4BQ9H444 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
CHMP4BQ9H444 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHMP4BQ9H444 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
CHMP4BQ9H444 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms