Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC68Q9H2F9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC68Q9H2F9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC68Q9H2F9 RASA4CP-201ENST00000424092 1398 ntBASIC21.2■□□□□ 0.98
CCDC68Q9H2F9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC68Q9H2F9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC68Q9H2F9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC68Q9H2F9 SLC25A24-204ENST00000569674 2357 ntBASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 AC091305.1-201ENST00000479476 895 ntBASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 AF213884.3-201ENST00000563833 479 ntBASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 AL139246.5-201ENST00000606645 996 ntBASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 AC007375.3-201ENST00000600936 2314 ntBASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC68Q9H2F9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC68Q9H2F9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 MIR939-201ENST00000401314 82 ntBASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 AC105233.4-201ENST00000642045 216 ntBASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CCDC68Q9H2F9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CCDC68Q9H2F9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC68Q9H2F9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC68Q9H2F9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC68Q9H2F9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC68Q9H2F9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.16■□□□□ 0.98
CCDC68Q9H2F9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CCDC68Q9H2F9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC68Q9H2F9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC68Q9H2F9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC68Q9H2F9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC68Q9H2F9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC68Q9H2F9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC68Q9H2F9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC68Q9H2F9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CCDC68Q9H2F9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC68Q9H2F9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC68Q9H2F9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC68Q9H2F9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC68Q9H2F9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC68Q9H2F9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CCDC68Q9H2F9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC68Q9H2F9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC68Q9H2F9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.14■□□□□ 0.98
CCDC68Q9H2F9 AP006587.3-201ENST00000525742 1516 ntBASIC21.14■□□□□ 0.98
CCDC68Q9H2F9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC68Q9H2F9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.14■□□□□ 0.98
CCDC68Q9H2F9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC68Q9H2F9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC68Q9H2F9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC68Q9H2F9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC68Q9H2F9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CCDC68Q9H2F9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms